Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2224 ATGGAAGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGAAAGACTTCTATGCTACAGACAGGATTGGACTGGCGGCCTTCGCTCTGGAATCAGGATCTTAGCCCCAACAACGTACATATTCTTTGCTTCAGCAATTCCAGTCATATCGTTCGGAGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACAGCACTTTGTGGCATCATCCACTCAATCTTTGGGGGACAGCCTCTGCTCATCCTTGGCGTCGCTGAACCAACCGTTTTGATGTATACGTTCATGTTCGAATTTGCAAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACGGGATGGGTATGTGTATGGACAGCCCTTTTGCTTTTCTTGCTGGCTGTGTTGGGTGCATGCTCCCTGATCAATAGGTTTACACGTCTTGCTGGAGAACTGTTTGGTTTGTTGATTGCTATGCTCTTTATGCAGCAGGCAATACGTGGTGTTGTGGAGGAATTCGGCATACCCCAGAGGGAAAATCCTAATCAGTTGGCGCTCCAACCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTTCTGTCCTTCGGGCTTCTACTAACTGGCCTTAAAAGCCGCAAGGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGGGGCTTTATCGCGGATTATGGAGTTCCACTTATGGTGCTCGTATGGACAGCCGTATCTTACATTCCAGTTAACAATGTCCCACATGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCGTACTCAAATTGGACGGTTATAAAGGAAATGTTGAGAGTTCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTTCTCCTAGGTTTCCTTGTTATACTGTGTGGACTTATAGGCATACCACCTTCCAATGGTGTAATTCCCCAGTCTCCGATGCACACGAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAACAAGCTGGTAGCAGCAGCGCGTCAAAGTTTCCGTAAAAATTCAAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATAATGAGATTCAGACTCCTTTAATTTACCAAAATCCACCCGCCGTGGGACTGAAGGAGTTGAAAGATTCCACGATCCAACTAGCTTCAAGAACTGGCTTCATCGATGCACCTGTTGATGAAACTGTTTTCGATGTGGATAAAGATATTGACGAACTTCTGCCAGTGGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTCTTAAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTTGCTTTCATGGCAATCGAAAGCTTGCCCGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACTTTCTTAGAAACTGTCCCCTTCAAAACAATTGCTACCTTCACCTTGTTTCAGACAGTTTATCTGCTGATGTGTTTTGGTTTAACCTGGATTCCAATTGCTGGTGTTCTTTTCCCGCTGTTGATCATGCTTCTTGTCCCGGTGCGACAGTATTTGCTCCCAAGGTTCTTCAAAGGCGCGCATCTTCAGGACTTGGATGCTGCTGAATATGAGGAAGCCCCTGCAATCGCTTTTAATCCGTCGTTCGAAGATCGAATGGGAAGAACTCCGAACATTGATGACGGTGAAATACTCGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGGCGTACGCAGAGTTCGAAAGTGACAAGCTCAACCCCAACTTCTCTAGAGGACATCAAACCTACCTACAGTCCACAGATGCCACAGAAACTGTACAGTCCAAGGATCAATGAGCTGAGAAGAGAGAGAAGTTCTCTATCTCCTGGAAAAGGACTTGACTTTAAGCCAAGTCCTAATGCAGAAGCAGAAGCAGGAGCAGGAGCAGGACCATCTTTTAGAAATTAG 2154 45.31 MEETFFPFRGIKNDIRERLLCYRQDWTGGLRSGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSIFGGQPLLILGVAEPTVLMYTFMFEFAKDRKELGQELFLAWTGWVCVWTALLLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQLALQPPWRFGNGMFALVLSFGLLLTGLKSRKARSWRYGTGCLRGFIADYGVPLMVLVWTAVSYIPVNNVPHGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAAARQSFRKNSNLSQLYRNMQEAYNEIQTPLIYQNPPAVGLKELKDSTIQLASRTGFIDAPVDETVFDVDKDIDELLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPRFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRRTQSSKVTSSTPTSLEDIKPTYSPQMPQKLYSPRINELRRERSSLSPGKGLDFKPSPNAEAEAGAGAGPSFRN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66604822 66609471 - Hsped.07g22240.1 Hepe07g2224 575619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2224 717 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe07g2224 717 Pfam HCO3- transporter integral membrane domain 202 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe07g2224 717 Pfam HCO3- transporter integral membrane domain 7 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe07g2224 717 PANTHER ANION EXCHANGE PROTEIN 6 638 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Hepe07g2224 717 MobiDBLite consensus disorder prediction 638 717 - -
Hepe07g2224 717 MobiDBLite consensus disorder prediction 646 674 - -
Hepe07g2224 717 Gene3D Helical hairpin bin 18 60 - -
Hepe07g2224 717 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1172 Hepe-Chr2:14587240 Hepe07g2224 Hepe-Chr7:66604822 0.0 dispersed
Hepe07g2224 Hepe-Chr7:66604822 Hepe10g0274 Hepe-Chr10:2874624 1.21e-257 dispersed
Hepe07g2224 Hepe-Chr7:66604822 Hepe02g1390 Hepe-Chr2:17587505 3.97e-271 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2224 K24194 - csv:101203606 1338.94