Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2227 ATGGAAGACCCCAAAACCCCAGAAACCCTAAAAGCTCAAAGCCCTGCGATGAATGAAATTAGCGATGATATTTCTGGGTTTTCTGGGTTGGTCGATTTGAGTGGTGGGTTATCGGTGGAGATTCCGCTTGCTGAAAATGGCGTAGCGGTTTGCAGTAACGATGCTGAGGTTAGCAATGTTGAATTGAGGAATGAAGGGGTTGAAGATGACAAGGGATTGGATGGTTCAGTGGGAGAAATTTTGGATGCTGGTGCTGAAGAAGACAGTGGTATTGGGGCTGATGATGACCAGAACGAAGGCGACACCGTGGAATTAGAGGTTGTTTCTACTGCTAATAACATGAAAGTTTCTGGAGATGGTATATCACTTTCAGTGGACTTCTCGAATATTCAGCCAGAAGAAACAGAACTTTCCAAGTCAGTACGAATGGTAGAAATGTCGAAAGAAGCTGGAGATGAAAAGCAAGTTATTGAAAATGGTCAAGAGCACAAATTTTCGGTTGGTGATGTGATATGGGTCAAGACCAAAAGTCAGACATGGTGGCCTGGAAAGATATATCCCTCAGATGCAGCAAAAAGTGACGAAAGTAGCGGGAATGCTAGTCTATTAGTTGGCTATTTTGGAAGCAGCCACATGACATGGTGCTATCCATCTCAGTTGATACCCTTTGCTGAAAACTTTGAGCAGATGTCTGGGAAATACAAGTCTCGGAGCTTCCTTGGAGCTGTAGAGAAAGCTGTGGATGAGTTTGGTAGGTGTGTGAAGTTGGAGTTGACGTGTTTGTGTATTCCAGAAGGAAGCCACCCTTTAGAAGGTGATGCTGGATTAAAGGATGCAGCTTCCCTGCCTGGGTGCAAGTCTGGTTTACTTGCTAAATATTCTGTTGATCGGTATGAAACCGAAACATTCCTAGCTCGTGTTAAGGGTCTTGCGCAGATTGTTTCCCTATGTGGAGCACTAGAGTTGAGTATCTTATATAATCAGTTAGCAGCTTTTCAAAGCTCAAAAGGGCACCAGCAGTTACCTTTGCATCAACTCTTGGAAACTCATGATGCTGAAGACAATGTGGGGGGCAAATCAGTGAGAAAAAGCAGAGTTCGTGTTACAGTTGGAGATGATGAAGAACAAGTAGAAAGTGACACACAGAGTTCACCATTAGAGACACTATCCACAGGATCAGGTGTTCTACGTAAAAAGAAAAAGATGAAAGGGAAGAATGGAGATTCAAATAAGGTTCTAGATGGAAGCATGGAAGTTGGGAAAAGGAGCTCTAGAAGAAAGGCAACTGCTAATGGAGGAATAGAATCAAGATCTGCAAAGAGAAAAAGAAGAGACAAATTTGAAGATTTTGAATCTAGTAAAATGGATTCTTCAATCAAGGGAGAGACTATCAATCCATTAACAGATGAAATCAAGGATTCTGGTGTAGAAAACTTCGATGATGGGAGTAAAGGGATGTCTGAAAAGAGATCTGAGACACGAGAGCGGAAGAAGAGCAAGTATTTGTCTTTTCCATATATAAACTGGGGGCAAAAAGTCATGCCAGCTGAAACAGAAGATATTAAGGCTCTTAAAACTTCTGGTGAAGGTGATGATGAAAACACAGATGAGGGCCAGAATGAAACCCCATTGCTATCTAAATGCAGTGGCAGTGGCAAGTTCTGGAATAAGTGGTACCGGAATATCACTAGTGGGAGTGATGTCGCTGATAATCAAAACTTGACGAGTGCATCACCAACTGAGTTTCTCTCTGAGCTTCATTTTACCGCTGTGAATTGTCTTTATCCAAACGAAAACAACAACTTTGATGCGGTGGCTCAGTTTTTCTCCAGATTTAGAATTTTGATGTTTCATGATGAATCTGTCAATGTTGGTCAAAATGAGGCAATGACTGCCGATTTATTCTTTCTTGGGGGACAAGTGTCAGAGGTTAAGCATCCTTCTTCGACTGGCAAATCTGGGATCAAGAAAAAAAAAAGTCAGGCAAGTTCTACTACGAAAATGGAAGAGATGAAATCCAAACTAATCTCTGATGATGTGGATTTGTCTGGAAAAGTTGAAATATGTCCTGCAGGAGATGCACAGAAAAAAACCCCGTTGACTTCCAATGCTAAATCAAAAAAAGATAGAGAAAGCTTGGGGAAAATGAAGACTAAATCCCTTTCTGCCTTGTCAGATGTGAACATTAACATTTCTTCCAGTAGCCTACTCACAAAAGATTCACCAGAGATTGGACCCCTCTCACCTAATGGTTTACCAAAGCGGCGAAGGAAGAGAAAGAACGATGGATCAGATCCCCAGAGTGAACCAACAACAGAGATACCAGATTTAAATGGAAGTGGTTCCGTAGTTGGCTTGTTGGTGGAAGATCAGCAGGTTGTGAGCCATGTTGCTTCACAACAAAAGTCTGAGCCAAAGAAGAGAAGGAAACTTGGAGCTCTTAAGGAGGATCCAAAGGTGTCTACTGAATTCACAGATGTGAATAACAACGATAAACCTGGTTCGTTTTTCATTGATCTACAGGTCACAACCCCACAACCACTTGGTGTAATTGCAGAGCAAAATAAAGTGGATTTTGAAGGAGCGCATAACCAGTCGGTGAAAGATCAGACAAATGGCCAGGATCAGAGCAAGTCAGGGGTCAAAAAGCGAAAGAAGAAGGAGAAATCACCATTGGCGGATCCAAAGGTTATCTTATCTTCTGATATACCAGATTTAAATGGAATGGGTGTTGAATCTAGTCAGGGGAAAGATTCCCAGTTGACGAACAACCTCCCGCTTCAGACTAAACCTAAGAGGAGAAGGAGGAAAAAGGGTGAAGCTGGTTTGAACCATCCAACTCCTTCTGACAGCAGACCATATATTTATAATAGAGTTGAAACTGATGGTGAAGGTTTAGGATCACTTCTTATCTTGACTTTTTCTTCAGAAGCTCCCTTACCTCCTCGGGAGCAAGTTATTACTACGTTTAGCCAGTTTGGATCATTGAAGGAATCAGAGATACAGTTGAAAGATTCAACTGTTGAGATAGTTTTCCTCCGAAGCGCTGATGCTATGGAAGCAGTGCGGAGTTTAAAAAAGAACAACAGTTTTGGCCCAACTCTTTTAAAATACCAGCTCTATCATCTCTCAGCTCCCCCCAGGACGTCAGACTCAGATCGGGCTTGCACAGCACTGGCCTATCCAGCTTCTGAGGGCACTCTGAACCCATCAAAGTCTGCTGAACCAGGATCTCAAGCAGGTGAGACAACGCCGGCGCCTATAGAGTTTATAAGGAAGAATCTTCAGATGATGACATCAATGTTGGAGAAGTCAGGAGACAATCTCTCCCCAGACATGAGAGCCAAATTGGAAAGCGATATCGAAGGCCTCCTCAAGAAGGAGCTTAGGCACAAGGCAGCAAGCGTACGACGAGTGGTGGGTGGTCAAATAAAGTCAGAATTGTGGGTTAGGCAGCTGGGTGGTGAAGGTTTGGTATTAATGGCTGGTCCTGAGGAAAACCCACATCTTGAAATTTGTGGTATAAAGGGAGATAATCAGCAAGCTGAGGGTCTGAATGGTGGTGAGAGGGATATGGCTCCGGTCACCGGCAATTCCATTCACAGGTCAGGTTCTCGTCCGCAGCTAGACCTCAGCAAAGCTGCAATTCAGGGAAATTTCGAGGAGAGAGACCCTACAATTCTGTTGCCTAACCAGTCTGATGATATATCTCATCTGGCTCTTGACATCGGCGGATCTCTCATCAAATTGGTGTACTTCTCAAGACATGAAGATCAATCGGTTGATGATAAGAGGAAGAGGAGCATGAAGCTGGGGTTTTCAAATGGTAATAGAAGAAGTTATCCAGTTCTTGGCGGGAGGCTTCATTTTGTGAAGTTTGAAACAAGCAAGATTAACGAGTGTTTAGACTTCATTCATTCCAAGCAGCTGCATCGTGGTGCGTGCAAAGATTTACCTCAATGGCATTCAGATGGCCCAGCAAATGAAAATGCCATCATTAAGGCTACAGGTGGAGGAGCATACAAGTTTGCAGATCTTTTTAAAGAAAGACTTGGAGTTAGCCTTGATAAAGAAGATGAAATGGATTGTCTTGTGGCTGGAGCAAATTTTTTGCTAAAGGCAATACGTCATGAAGCTTTCACTCATATGGAGGGTAAAAAAGAGTTCGTGCAACTTGACCATAACGAAATGTTTCCTTTTCTGCTTGTTAACATTGGATCTGGTGTCAGCATGATCAAGGTTGATGGTGATGGGAAATTTCAGAGAGTTAGTGGGACAAATGTTGGAGGGGGCACTTACTGGGGCTTAGGAAGGCTGTTAACAAAATGTAATAGTTTTGATGAGTTGTTAGAGCTTAGTCAGAAGGGAGATAACAGCACAATTGACATGCTTGTTGGGGACATATATGGTGGCATGGATTACTCTAAGATTGGTCTTTCTGCGTCAACAATTGCATCTAGTTTTGGCAAGACCATCTCAGAGAACAAGGAGCTTGAAGACTACAGACCAGAAGATATCTCATTGTCTCTCTTGCGAATGATCTCGTATAACATTGGACAGGTCGAAAGGAGAAGCACAAGCAATGTTCTTGCGTCATGA 4599 42.9 MEDPKTPETLKAQSPAMNEISDDISGFSGLVDLSGGLSVEIPLAENGVAVCSNDAEVSNVELRNEGVEDDKGLDGSVGEILDAGAEEDSGIGADDDQNEGDTVELEVVSTANNMKVSGDGISLSVDFSNIQPEETELSKSVRMVEMSKEAGDEKQVIENGQEHKFSVGDVIWVKTKSQTWWPGKIYPSDAAKSDESSGNASLLVGYFGSSHMTWCYPSQLIPFAENFEQMSGKYKSRSFLGAVEKAVDEFGRCVKLELTCLCIPEGSHPLEGDAGLKDAASLPGCKSGLLAKYSVDRYETETFLARVKGLAQIVSLCGALELSILYNQLAAFQSSKGHQQLPLHQLLETHDAEDNVGGKSVRKSRVRVTVGDDEEQVESDTQSSPLETLSTGSGVLRKKKKMKGKNGDSNKVLDGSMEVGKRSSRRKATANGGIESRSAKRKRRDKFEDFESSKMDSSIKGETINPLTDEIKDSGVENFDDGSKGMSEKRSETRERKKSKYLSFPYINWGQKVMPAETEDIKALKTSGEGDDENTDEGQNETPLLSKCSGSGKFWNKWYRNITSGSDVADNQNLTSASPTEFLSELHFTAVNCLYPNENNNFDAVAQFFSRFRILMFHDESVNVGQNEAMTADLFFLGGQVSEVKHPSSTGKSGIKKKKSQASSTTKMEEMKSKLISDDVDLSGKVEICPAGDAQKKTPLTSNAKSKKDRESLGKMKTKSLSALSDVNINISSSSLLTKDSPEIGPLSPNGLPKRRRKRKNDGSDPQSEPTTEIPDLNGSGSVVGLLVEDQQVVSHVASQQKSEPKKRRKLGALKEDPKVSTEFTDVNNNDKPGSFFIDLQVTTPQPLGVIAEQNKVDFEGAHNQSVKDQTNGQDQSKSGVKKRKKKEKSPLADPKVILSSDIPDLNGMGVESSQGKDSQLTNNLPLQTKPKRRRRKKGEAGLNHPTPSDSRPYIYNRVETDGEGLGSLLILTFSSEAPLPPREQVITTFSQFGSLKESEIQLKDSTVEIVFLRSADAMEAVRSLKKNNSFGPTLLKYQLYHLSAPPRTSDSDRACTALAYPASEGTLNPSKSAEPGSQAGETTPAPIEFIRKNLQMMTSMLEKSGDNLSPDMRAKLESDIEGLLKKELRHKAASVRRVVGGQIKSELWVRQLGGEGLVLMAGPEENPHLEICGIKGDNQQAEGLNGGERDMAPVTGNSIHRSGSRPQLDLSKAAIQGNFEERDPTILLPNQSDDISHLALDIGGSLIKLVYFSRHEDQSVDDKRKRSMKLGFSNGNRRSYPVLGGRLHFVKFETSKINECLDFIHSKQLHRGACKDLPQWHSDGPANENAIIKATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGKKEFVQLDHNEMFPFLLVNIGSGVSMIKVDGDGKFQRVSGTNVGGGTYWGLGRLLTKCNSFDELLELSQKGDNSTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISENKELEDYRPEDISLSLLRMISYNIGQVERRSTSNVLAS 1532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66654258 66666414 + Hsped.07g22270.1 Hepe07g2227 575622

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2227 1532 CDD PWWP 168 249 - -
Hepe07g2227 1532 Gene3D - 154 257 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 912 928 - -
Hepe07g2227 1532 Pfam Fumble 1238 1522 IPR004567 GO:0004594(InterPro)|GO:0005524(InterPro)|GO:0015937(InterPro)
Hepe07g2227 1532 SUPERFAMILY Actin-like ATPase domain 1350 1523 IPR043129 -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 1064 1080 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 801 822 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 352 497 - -
Hepe07g2227 1532 Pfam PWWP domain 168 249 IPR000313 -
Hepe07g2227 1532 SUPERFAMILY Tudor/PWWP/MBT 162 266 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 352 374 - -
Hepe07g2227 1532 ProSiteProfiles PWWP domain profile. 167 226 IPR000313 -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 1063 1085 - -
Hepe07g2227 1532 PANTHER PANTOTHENATE KINASE 1210 1521 IPR004567 GO:0004594(InterPro)|GO:0004594(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0015937(InterPro)|GO:0015937(PANTHER)
Hepe07g2227 1532 Gene3D - 1230 1391 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 436 456 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 693 717 - -
Hepe07g2227 1532 FunFam Pantothenate kinase 1 1238 1377 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 736 830 - -
Hepe07g2227 1532 FunFam Pantothenate kinase 2 1230 1391 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 702 716 - -
Hepe07g2227 1532 Gene3D - 1457 1498 - -
Hepe07g2227 1532 SUPERFAMILY Actin-like ATPase domain 1236 1378 IPR043129 -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 645 670 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 473 497 - -
Hepe07g2227 1532 SMART PWWP_4 165 224 IPR000313 -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 864 955 - -
Hepe07g2227 1532 MobiDBLite consensus disorder prediction 645 676 - -
Hepe07g2227 1532 NCBIfam type II pantothenate kinase 1238 1524 IPR004567 GO:0004594(InterPro)|GO:0005524(InterPro)|GO:0015937(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2227 K24265 - - csv:101223078 742.651
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2227 Hepe-Chr7:66654258 Hepe10g1637 Hepe-Chr10:53083199 8.47e-115 dispersed
Hepe07g2226 Hepe-Chr7:66636980 Hepe07g2227 Hepe-Chr7:66654258 3.97e-239 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g757 Blo04g00734 . . . . . . . . Cmo18g00128 . . . . . . . . . . . . . . . . . . . . . . Cone16ag0101 Cone13ag0142 . Lsi02g00371 Csa01g00852 Chy12g01267 Cme12g01694 . . . Bda14g00811 . Bpe15g00638 Bma03g00781 . . . . . Cma18g00170 . Car18g00161 Cpe09g01025 . Bhi08g01609 Tan05g2008 . Lac10g0449 Hepe07g2227 . . Cla01g01300 Cam01g1429 Cec01g1464 Cco01g1460 Clacu01g1366 Cmu01g1272 Cre01g1264 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004937 3 2 2 3 3 1 2 0 1 0 1 1 2 1 1 1 2 0 2 1 1 1 1 1 1 0 2 2 2 1 41