Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2231 | ATGAGGAATTTCAACTTGTTCAAGCCAATTTCGATCAATGGGAAGCCTGGGAGGAGGCTTTCTCTTGGAGAATACGAGCGGGCTGTTTCCTGGTCTAAGTATTTGGTGTCATCAGGTGCAGAAATAAAGGGAGAAGGTGAAGAAGAATGGAGTGCAGATATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGACACAGCAGGATTTACAGAGGCGTGTATAAGCAAAGGGATGTTGCAATTAAGCTGATAAGTCAGCCAGAACAGGATGAAAACTTGGCAAATTTTCTTGAGAATCAGTTCATTTCTGAGGTTGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAAACTCCAGTGTTTTGTATCATCACGGAGTACATGGCAGGGGGTTCGTTAAGAAAATATCTCCATCAGCAGGTGCCACATTCCGTTCCGCTGGACTTGGTTCTGAAACTAGCCCTCGACATCTCACGCGGAATGCAGTTCCTTCATTCTCAGGGAATACTTCACAGAGATCTCAAATCAGAAAATCTTTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAGTGCGGAAGCGCAAAGGGATTCACCGGAACTTACCGCTGGATGGCACCGGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGGTAACAATCACTCTTGTATGTTTCTTTTGGTACAATTCTGGTTGCCTCATCACTTCTTGTGCTAATTTTAGCTTCAGTTGA | 897 | 43.03 | MRNFNLFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEQDENLANFLENQFISEVALLFRLRHPNIITFIAACKKTPVFCIITEYMAGGSLRKYLHQQVPHSVPLDLVLKLALDISRGMQFLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKVTITLVCFFWYNSGCLITSCANFSFS | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 66746012 | 66749051 | - | Hsped.07g22310.1 | Hepe07g2231 | 575626 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2231 | 298 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | Pfam | Protein tyrosine and serine/threonine kinase | 63 | 272 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 279 | IPR011009 | - | |
Hepe07g2231 | 298 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 284 | - | - | |
Hepe07g2231 | 298 | FunFam | Serine/threonine-protein kinase isoform 1 | 47 | 139 | - | - | |
Hepe07g2231 | 298 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 139 | - | - | |
Hepe07g2231 | 298 | CDD | STKc_MAP3K-like | 66 | 272 | - | - | |
Hepe07g2231 | 298 | SMART | serkin_6 | 57 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 55 | 270 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe07g2231 | 298 | ProSiteProfiles | Protein kinase domain profile. | 57 | 298 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | PRINTS | Tyrosine kinase catalytic domain signature | 219 | 229 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | PRINTS | Tyrosine kinase catalytic domain signature | 173 | 191 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2231 | 298 | PRINTS | Tyrosine kinase catalytic domain signature | 135 | 148 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1728 | Hepe-Chr4:72315749 | Hepe07g2231 | Hepe-Chr7:66746012 | 1.18e-110 | dispersed | |
Hepe07g2231 | Hepe-Chr7:66746012 | Hepe08g2053 | Hepe-Chr8:57646493 | 6.49e-83 | dispersed | |
Hepe02g1834 | Hepe-Chr2:28060911 | Hepe07g2231 | Hepe-Chr7:66746012 | 1.65e-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72988 | PF07714 | PK_Tyr_Ser-Thr | 8.10E-53 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2231 | - | - | - | 0.0 |