Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2231 ATGAGGAATTTCAACTTGTTCAAGCCAATTTCGATCAATGGGAAGCCTGGGAGGAGGCTTTCTCTTGGAGAATACGAGCGGGCTGTTTCCTGGTCTAAGTATTTGGTGTCATCAGGTGCAGAAATAAAGGGAGAAGGTGAAGAAGAATGGAGTGCAGATATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGACACAGCAGGATTTACAGAGGCGTGTATAAGCAAAGGGATGTTGCAATTAAGCTGATAAGTCAGCCAGAACAGGATGAAAACTTGGCAAATTTTCTTGAGAATCAGTTCATTTCTGAGGTTGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAAACTCCAGTGTTTTGTATCATCACGGAGTACATGGCAGGGGGTTCGTTAAGAAAATATCTCCATCAGCAGGTGCCACATTCCGTTCCGCTGGACTTGGTTCTGAAACTAGCCCTCGACATCTCACGCGGAATGCAGTTCCTTCATTCTCAGGGAATACTTCACAGAGATCTCAAATCAGAAAATCTTTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAGTGCGGAAGCGCAAAGGGATTCACCGGAACTTACCGCTGGATGGCACCGGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGGTAACAATCACTCTTGTATGTTTCTTTTGGTACAATTCTGGTTGCCTCATCACTTCTTGTGCTAATTTTAGCTTCAGTTGA 897 43.03 MRNFNLFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEQDENLANFLENQFISEVALLFRLRHPNIITFIAACKKTPVFCIITEYMAGGSLRKYLHQQVPHSVPLDLVLKLALDISRGMQFLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKVTITLVCFFWYNSGCLITSCANFSFS 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66746012 66749051 - Hsped.07g22310.1 Hepe07g2231 575626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2231 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 Pfam Protein tyrosine and serine/threonine kinase 63 272 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 SUPERFAMILY Protein kinase-like (PK-like) 48 279 IPR011009 -
Hepe07g2231 298 Gene3D Transferase(Phosphotransferase) domain 1 140 284 - -
Hepe07g2231 298 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Hepe07g2231 298 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Hepe07g2231 298 CDD STKc_MAP3K-like 66 272 - -
Hepe07g2231 298 SMART serkin_6 57 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 PANTHER SERINE-THREONINE PROTEIN KINASE 55 270 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe07g2231 298 ProSiteProfiles Protein kinase domain profile. 57 298 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2231 298 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1728 Hepe-Chr4:72315749 Hepe07g2231 Hepe-Chr7:66746012 1.18e-110 dispersed
Hepe07g2231 Hepe-Chr7:66746012 Hepe08g2053 Hepe-Chr8:57646493 6.49e-83 dispersed
Hepe02g1834 Hepe-Chr2:28060911 Hepe07g2231 Hepe-Chr7:66746012 1.65e-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72988 PF07714 PK_Tyr_Ser-Thr 8.10E-53 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2231 - - - 0.0