Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2248 ATGGCTATCCCTAATTTACTTTTCTTCCTTCTCCTCTCCATCCCCTTCTTCCCCGTCGACTCCAAACTCACCCTCGGTTATTACCAAAAGACGTGTCCCAACTTCGAGAAGATCATCCGCGAGACCGTCACCTCTAAGCAAATCGATAGCCCTGTCACCGCCGCCGGAACCCTCCGCCTCTTCTTCCATGACTGCATGGTCGATGGCTGCGACGCCTCCGTCCTCATTTCCTCCAATACCTTCAATAAAGCCGAGCGCGAGGCCGACATCAACCACTCCCTCTCCGGTGACGCCTTTGACGTCGTCGTCCATGCCAAGACCAACCTCGAACTTTCCTGCCCTGGCATTGTCTCTTGTTCAGACATCTTAGCACAGGCGACTCGGGACCTGGTGGTGATGGTGGGAGGCCCATTCTACAACGTGAAACTAGGTCGAAAAGATGGGCTAATTTCAAAAGTAGAAAACGTGGAAGGAAACCTCCCAAAAGTGGATCACACGGTAGACCAACTCATAACTTTCTTCACATCAAAAGGCTTCACCATCCAAGAACTCGTCGCCCTCTCCGGCGGCCACACGATCGGGTTCTCCCACTGCAAGGAGTTCTCCGACCGCCTCTTCAACTTCAGTCCGGCCTGTCCGACCGACCCCGACATCTACCCTAAATTCGCCGACAAACTCAAGTCCATGTGCGCAAATTTCAAAGCAGACAACGCCATGTCAGCATTCAACGACGTCATGACACCTGGCAAATTCGACAACATGTACTTCCAGAACCTGGGACGTGGCCTCGGCTTATTGGCTACTGACAATGCCCTCGTTAAAGATCCTAGGACCAGGCCGTTTGTCGAACTTTATGCCGTGAATCAGACGGCGTTTTTTAAAGACTTTGCTCACGGTATGGAGAAACTCAGCGTTTACGGCGTTAAGATGGGACGGAAAGGGGAGGTTCGACGAAGGTGTGATCTCTTCAATTCAATTCAGACATAA 987 51.77 MAIPNLLFFLLLSIPFFPVDSKLTLGYYQKTCPNFEKIIRETVTSKQIDSPVTAAGTLRLFFHDCMVDGCDASVLISSNTFNKAEREADINHSLSGDAFDVVVHAKTNLELSCPGIVSCSDILAQATRDLVVMVGGPFYNVKLGRKDGLISKVENVEGNLPKVDHTVDQLITFFTSKGFTIQELVALSGGHTIGFSHCKEFSDRLFNFSPACPTDPDIYPKFADKLKSMCANFKADNAMSAFNDVMTPGKFDNMYFQNLGRGLGLLATDNALVKDPRTRPFVELYAVNQTAFFKDFAHGMEKLSVYGVKMGRKGEVRRRCDLFNSIQT 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66877944 66879286 + Hsped.07g22480.1 Hepe07g2248 575643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2248 328 FunFam Peroxidase 26 170 - -
Hepe07g2248 328 PANTHER - 11 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 Pfam Peroxidase 40 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Hepe07g2248 328 Gene3D - 26 324 - -
Hepe07g2248 328 FunFam Peroxidase 161 303 - -
Hepe07g2248 328 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g2248 328 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Hepe07g2248 328 Gene3D Peroxidase, domain 2 161 303 - -
Hepe07g2248 328 CDD secretory_peroxidase 22 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe07g2248 328 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1893 Hepe-Chr2:30550559 Hepe07g2248 Hepe-Chr7:66877944 5.60e-136 dispersed
Hepe04g1303 Hepe-Chr4:68627512 Hepe07g2248 Hepe-Chr7:66877944 3.69e-92 dispersed
Hepe07g1885 Hepe-Chr7:62458456 Hepe07g2248 Hepe-Chr7:66877944 1.42e-87 dispersed
Hepe07g2248 Hepe-Chr7:66877944 Hepe10g1419 Hepe-Chr10:50858904 1.57e-92 dispersed
Hepe02g3126 Hepe-Chr2:80450442 Hepe07g2248 Hepe-Chr7:66877944 1.02e-132 wgd
Hepe07g2248 Hepe-Chr7:66877944 Hepe09g0171 Hepe-Chr9:1362611 1.55e-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2248 K00430 - csv:101220163 543.502