Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2276 ATGGGGAAAGATTACTACAACATACTGAAAGTGAGCCGAAGCGCTAGCGATGAAGATTTGAAGAGAGCTTACAAGCGATTAGCATTGTTTTGGCATCCAGACAAGAACCCTTCAAACAAGCAAGAAGCTGAAGCCAAGTTCAAACAAATTTCTGAAGCTTATGATGTTCTTAGCGATCCTCAGAAGCGTCAGATCTACGACCTTTACGGTGAGGAAACCCTCAAGTCCGGCAAGATTCCGCCGCCCACGCCTCAAGCTTCCTCCTCCTCCTCCTCTGCGTATTCTCCGGTTTACCAGCAGTTTCAACGGCAGCAACCCAATACTTCGACGTTCAAGTTTAAACCTAGGAACGCGGATGATATTTATGCCGAATTTTTCGGATCGGAGGGCGGTGGCGGTGGCGGTGGCGGTGGCAATGTCGATGGGGGAGGCAAGAGCGGAGGGGTTAGGGATGCGTTTAATAGGTTTCAGAATAAGATGGAGAATGGGAGTGGTGGTGCTCAGGGGAGGAAGGCTGCTGCAATTGAGAATACGTTGCCTTGTAGCTTGGAGGAGCTCTACAAAGGCGCCAAAAAGAAGATGAGGATTTCGAGGAATGTGTATGATGTTTCTGGCAAGTTCCGGACAGTTGAAGAGATATTGACAATCGATATAAAACCAGGATGGAAGAAGGGGACGAAGATTACTTTTCCTCAGAAGGGAAATCAGGAGCCTGGCATCATTCCAGCAGATCTTATATTTGTAGTTGATGAGAAACCACATGCTATATACCGGAGGGATGTGAATGATGTAGTGGTGAACCACGAAATAACGCTGCTGGAATCGCTCACAGGTAAAACTCTTGAACTTATTTCTCTGGATGGAAGGAATCTCATGATCCCTATAACAGATATTGTGAAACCTGGTGATGAGATGGTTGTGCCAAATGAAGGGATGCCAATCTCAAAGGAACCAGGGAAGAAGGGAAACTTGAGAATCAAGTTTGATGTGAAGTATCCACCTAGGCTTACAACTGAACAGAAGTCTGATCTGATAAGAGTTCTTGGTGTAGTTTCATAG 1059 46.08 MGKDYYNILKVSRSASDEDLKRAYKRLALFWHPDKNPSNKQEAEAKFKQISEAYDVLSDPQKRQIYDLYGEETLKSGKIPPPTPQASSSSSSAYSPVYQQFQRQQPNTSTFKFKPRNADDIYAEFFGSEGGGGGGGGGNVDGGGKSGGVRDAFNRFQNKMENGSGGAQGRKAAAIENTLPCSLEELYKGAKKKMRISRNVYDVSGKFRTVEEILTIDIKPGWKKGTKITFPQKGNQEPGIIPADLIFVVDEKPHAIYRRDVNDVVVNHEITLLESLTGKTLELISLDGRNLMIPITDIVKPGDEMVVPNEGMPISKEPGKKGNLRIKFDVKYPPRLTTEQKSDLIRVLGVVS 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67079620 67082514 + Hsped.07g22760.1 Hepe07g2276 575671

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2276 352 Pfam DnaJ C terminal domain 176 333 IPR002939 -
Hepe07g2276 352 FunFam DnaJ subfamily B member 13 3 136 - -
Hepe07g2276 352 FunFam Dnaj homolog subfamily b member 171 252 - -
Hepe07g2276 352 CDD DnaJ_C 175 336 - -
Hepe07g2276 352 CDD DnaJ 4 59 IPR001623 -
Hepe07g2276 352 MobiDBLite consensus disorder prediction 80 95 - -
Hepe07g2276 352 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 349 IPR051339 GO:0005829(PANTHER)|GO:0051082(PANTHER)|GO:0051085(PANTHER)|GO:0051087(PANTHER)
Hepe07g2276 352 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Hepe07g2276 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 257 342 IPR008971 GO:0006457(InterPro)|GO:0051082(InterPro)
Hepe07g2276 352 SUPERFAMILY Chaperone J-domain 3 81 IPR036869 -
Hepe07g2276 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 176 254 IPR008971 GO:0006457(InterPro)|GO:0051082(InterPro)
Hepe07g2276 352 Pfam DnaJ domain 4 67 IPR001623 -
Hepe07g2276 352 PRINTS DnaJ domain signature 42 62 IPR001623 -
Hepe07g2276 352 PRINTS DnaJ domain signature 62 81 IPR001623 -
Hepe07g2276 352 PRINTS DnaJ domain signature 6 24 IPR001623 -
Hepe07g2276 352 PRINTS DnaJ domain signature 24 39 IPR001623 -
Hepe07g2276 352 Gene3D - 254 333 - -
Hepe07g2276 352 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Hepe07g2276 352 Gene3D - 173 252 - -
Hepe07g2276 352 SMART dnaj_3 3 62 IPR001623 -
Hepe07g2276 352 Gene3D DnaJ domain 1 81 IPR036869 -
Hepe07g2276 352 FunFam DnaJ subfamily B member 13 254 334 - -
Hepe07g2276 352 MobiDBLite consensus disorder prediction 127 148 - -
Hepe07g2276 352 MobiDBLite consensus disorder prediction 73 95 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2276 K09510 - - csv:101215798 601.668
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1875 Hepe-Chr4:73698710 Hepe07g2276 Hepe-Chr7:67079620 5.99e-122 dispersed
Hepe07g2276 Hepe-Chr7:67079620 Hepe08g0421 Hepe-Chr8:3726774 8.12e-59 dispersed
Hepe02g0763 Hepe-Chr2:8381906 Hepe07g2276 Hepe-Chr7:67079620 1.19e-10 transposed
Hepe04g0581 Hepe-Chr4:58762558 Hepe07g2276 Hepe-Chr7:67079620 4.11e-10 transposed
Hepe06g1132 Hepe-Chr6:60278977 Hepe07g2276 Hepe-Chr7:67079620 1.05e-15 transposed
Hepe07g0114 Hepe-Chr7:1067032 Hepe07g2276 Hepe-Chr7:67079620 1.36e-11 transposed
Hepe10g1703 Hepe-Chr10:53736581 Hepe07g2276 Hepe-Chr7:67079620 9.97e-130 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g489 Blo04g00756 Blo16g00200 . . . Bpe13g00271 Bma06g00188 . Cmo13g00951 Cmo18g00102 . . . . . Cpe20g00207 . . . . . . . . . . . . . . . Cone2ag0864 Cone16ag0143 . . . Csa01g00799 Chy12g01317 Cme12g01743 . . Bda11g01684 Bda14g00836 . Bpe15g00616 Bma03g00809 . Sed08g2567 . . . Cma18g00131 Car13g00762 Car18g00123 Cpe09g01061 . Bhi08g01425 Tan05g2072 Cmetu12g0983 Lac10g0382 Hepe07g2276 . . Cla01g01417 Cam01g1483 Cec01g1522 Cco01g1569 Clacu01g1507 Cmu01g1399 Cre01g1319 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006344 2 2 2 2 2 1 2 1 1 1 1 1 0 1 1 2 1 2 2 1 1 1 1 1 1 0 1 3 1 0 38