Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2279 ATGGCGCCTTCCTCGTCTACAAGCTTCCTTCGCACTCCAACCCTTCTCTTTTTTATCATCACAATGAAACCCTTTTCTTCATTCTTGTCTATCTCAACCTCAGCAACCTCAATCTGCAAGAATTTTCAAATGGGCATCTTGATTTTGGCTTTCTCATCGCTTTTACTTTCAACCCTTTTCAGCCATTGCTCTCTTGCTCTTACTCCTGATGGGCTAACGTTGTTGGAAATTCGAAGCGCTTTTAATGATAGCAAAAACCTTCTTGGTGATTGGGAAGCTTCTGATGAGTTTCCCTGCAAATGGACTGGTATCTCTTGTCACCCTGAGGACCAACGGGTCAGCTCAATTAACTTACCTTACATGCAACTAGGAGGGATAATTTCTCCCATCATTGGTAGACTCAGTAGATTACAGAGACTGGCACTTCACCAAAATGGCTTACATGGTTATATTCCTAATGAAATCGCTAAATGTACTCAGCTCAGAGCTCTGTATTTGAGGTCTAATTATCTCCAAGGTGGCATACCATCGGATATTGGAAACCTTTCTGCTCTTACAATACTGGATTTATCAAGCAATTCGTTGAAGGGTTCTATTCCATCATCCATTGGCCGTCTTTCACTTCTGCGCCATTTGAATTTGTCCACAAACTTTTTCTCTGGGGAAATTCCAGATTTTGGAATTCTTAGCACTTTTGGAAGCAATTCGTTCACTGGCAATCTAGATCTCTGTGGTCATCAAGTAAACAAGGCCTGCCGAACCTCGTTGGGATTCCCTGCAGTGTTGCCTCATGCTGAAAGTGATGAAGCTTCTGTTCCTGGGAAAAGACCTTCACATTACATCAAAGGGGTATTAATTGGTGCAATGTCCACTATGGGTGCTGCACTTGTAGTGCTTGTTCCATTCTTGTGGATCCGTTGGCTATCAAAGAAGGAAAGGGCTGCCAAGAGATACACAGAAGTCAAAAAGCAAGTGGTTCATGAACCAAGCACAAAACTTATTACTTTTCACGGTGACCTACCATACCCATCATGTGAGATCATAGAAAAGCTGGAGTCACTAGATGAAGAAGATGTTGTCGGTTCAGGAGGATTTGGTGTCGTATACCGAATGGTCATGAATGATTGTGGAACATTTGCTGTGAAAAAGATTGATGGAAGCAGAAAAGGTTCAGAGCAAGTGTTTGAGAGAGAGTTGGAGGTTTTGGGTTGCATCAAACATATAAATCTGGTCAATTTGCGGGGATACTGTAGTATTCCAACTTCAAAACTTCTTATCTACGACTTTCTAGCAATGGGGAGCTTAGATGATTTCTTGCATGAACAGGGACCAGAAAAAGAGCCTTTGGATTGGAGAGCTCGTCTAAGGATAGCATTGGGCTCTGCTAAGGGGATTGCATACTTACACCATGATTGTTGTCCAAAGATCGTGCATCGTGATATTAAATCGAGTAACATTCTACTTGATGAAAACTTGGAGCCCCATGTATCTGACTTTGGACTGGCCAAGCTTTTGGTTGATGATGATGCTCATGTCACAACTGTTGTTGCTGGAACATTTGGTTATTTGGCTCCAGAATACCTACAAAGTGGGAGAGCAACTGAAAAATCAGATGTTTATAGCTACGGAGTTTTATTACTGGAGCTGGTGACTGGGAAGAGACCAACCGATCCATCATTTGTAAAGAGAGGCTTAAATGTTGTTGGTTGGATGCACACATTATTGGGAGAAAACAAAATGGATGAGATAGTTGACAAAAGGTGCAAGGATGTCGATGCCGATACTGTAGAAGCAATTCTTGAAATAGCAGCCAAATGCACGGATGCCGACCCAGACAATCGGCCATCAATGAGTCAAGTTTTGCAGTTTCTTGAGCAAGAAATCATGTCACCTTGTCCTAGTGATTTCTACGAGTCTCATTCTGATTATTCTTGA 1935 42.12 MAPSSSTSFLRTPTLLFFIITMKPFSSFLSISTSATSICKNFQMGILILAFSSLLLSTLFSHCSLALTPDGLTLLEIRSAFNDSKNLLGDWEASDEFPCKWTGISCHPEDQRVSSINLPYMQLGGIISPIIGRLSRLQRLALHQNGLHGYIPNEIAKCTQLRALYLRSNYLQGGIPSDIGNLSALTILDLSSNSLKGSIPSSIGRLSLLRHLNLSTNFFSGEIPDFGILSTFGSNSFTGNLDLCGHQVNKACRTSLGFPAVLPHAESDEASVPGKRPSHYIKGVLIGAMSTMGAALVVLVPFLWIRWLSKKERAAKRYTEVKKQVVHEPSTKLITFHGDLPYPSCEIIEKLESLDEEDVVGSGGFGVVYRMVMNDCGTFAVKKIDGSRKGSEQVFERELEVLGCIKHINLVNLRGYCSIPTSKLLIYDFLAMGSLDDFLHEQGPEKEPLDWRARLRIALGSAKGIAYLHHDCCPKIVHRDIKSSNILLDENLEPHVSDFGLAKLLVDDDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSYGVLLLELVTGKRPTDPSFVKRGLNVVGWMHTLLGENKMDEIVDKRCKDVDADTVEAILEIAAKCTDADPDNRPSMSQVLQFLEQEIMSPCPSDFYESHSDYS 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67118446 67122960 + Hsped.07g22790.1 Hepe07g2279 575674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2279 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2279 644 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 67 229 - -
Hepe07g2279 644 Pfam Leucine rich repeat N-terminal domain 69 106 IPR013210 -
Hepe07g2279 644 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 430 635 - -
Hepe07g2279 644 Gene3D Transferase(Phosphotransferase) domain 1 430 632 - -
Hepe07g2279 644 ProSiteProfiles Protein kinase domain profile. 354 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2279 644 Gene3D Ribonuclease Inhibitor 69 254 IPR032675 -
Hepe07g2279 644 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515(InterPro)
Hepe07g2279 644 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Hepe07g2279 644 Pfam Leucine Rich Repeat 209 225 IPR001611 GO:0005515(InterPro)
Hepe07g2279 644 SUPERFAMILY Protein kinase-like (PK-like) 334 625 IPR011009 -
Hepe07g2279 644 Gene3D Phosphorylase Kinase; domain 1 313 429 - -
Hepe07g2279 644 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2279 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 223 626 IPR050647 -
Hepe07g2279 644 SUPERFAMILY L domain-like 68 245 - -
Hepe07g2279 644 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524(InterPro)
Hepe07g2279 644 SMART serkin_6 354 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1920 Hepe-Chr1:84021135 Hepe07g2279 Hepe-Chr7:67118446 1.15e-71 dispersed
Hepe02g3275 Hepe-Chr2:82360636 Hepe07g2279 Hepe-Chr7:67118446 4.83e-54 dispersed
Hepe07g2076 Hepe-Chr7:65043619 Hepe07g2279 Hepe-Chr7:67118446 1.51e-68 dispersed
Hepe07g2279 Hepe-Chr7:67118446 Hepe10g0030 Hepe-Chr10:283159 9.73e-76 dispersed
Hepe01g1565 Hepe-Chr1:80849149 Hepe07g2279 Hepe-Chr7:67118446 1.27e-162 transposed
Hepe07g0840 Hepe-Chr7:10597574 Hepe07g2279 Hepe-Chr7:67118446 1.93e-158 transposed
Hepe07g2279 Hepe-Chr7:67118446 Hepe09g0139 Hepe-Chr9:1102754 8.43e-281 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72990 PF00069 Pkinase 1.10E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2279 - - - 0.0