Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2287 ATGGAGGCTGCTAATGTTTTTGGCCGTCTGAGACCGGTCGTCAAGACCGAGAAGCCCGCCGGAGATGGCGACGGTGACGGTGACGGAGATAATTCTCCCTCTAAACAACGTCTTCTTGTTAAGGAGGATCAACTGGAATCTACTCGAGCAGAAATGGGAGAAGTGAGAGAAGAAAACCAGAGGCTAAAAACGAGTTTAAACCAAATCATGAAGGATTACGAAGCCCTACGGATGCAATTCCTAGGGATCGTCGGAGGAGACATGAAGAAAATACCTCAAGTCGATGACAAATCCAACAACGAACAACACAACGACGATCAAACAGATGAAACTGAACTGATTTCACTAACATTGGGGAGATTTCCGATGACAGAGAAGAATAAGAAGGCAACCGACAAGAAAGATAAAACCAACATGAGTTCTCAAGGACGAGAGATTATAGGTGACGGACAAGTCGTTAAAGAGTCTTTATCTCTTGGTTTGAACTGCAAATTCGAACGAGAATCAACGATAGTTAAAGAAGTTGATTCTTTGAATCGGAGTCTAACAAATAGTTTAGATCATGAGGCGAAGGAGGAAGCTGGAGAGACGACTTGGCCGCCAAGTAAAGGAACGAAGACGATGAGAAGCGATGACGATGATGTTACGCCGCAGAATCCACCCAAGCGCGCTAGGGTTTGTGTTAGAGCCCGATGCGAAACCGCTACGATGAACGATGGTTGCCAATGGAGGAAATACGGGCAAAAGATAGCGAAAGGAAACCCATGTCCAAGAGCATACTACCGTTGCACGGGCTCGCCGACATGTCCGGTAAGAAAACAAGTCCAAAGATGTGCCGACGACATGTCGATCTTAATCACCACCTACGAAGGCACCCACAACCACCAATTACCAGTCTCCGCCACCGCCATGGCATCCACCACCTCCGCGGCGGCCTCCATGCTCCTCTCCGGCTCCTCCTCTTCCACCGCCCCAAACCCATCCTCTTCCACAAATCTCCATGGCCTAAACTTTTACCCAAATTCTAATAAATTATCAAATCATAATTTTTACTTACCCAATTCCTCTATTAATTCATCAACTTCTCCAACAATCACTTTAGACCTCACTTCAAACTCATCCTCCTCTTCAATTTCCACCTCCTCCCATTTCGGTAAATTCCCCTCCACTTTCGCCAATTCTCGATACCCTTTTACAAGCCAACTCGATTTCGGATCTTCTAGAAACAATGTCTTGTCGTGGAATAACGGTTTGTTTAGTTACAACAGAAATAACAACCCTACTGCAACCACCAATAATATCTATCAAAACTACATCCAACAACAACAACGTAATAATAATCTTAATCATCATAATAATGTTGTCTCGGCGGCCGCCGCCACGTCACTGTCACATCAGCCACAACAACCTTTGCCCGATACTATTGCCGCCGCCACCAAGGCCATCACGGCGGATCCAAGCTTCCAATCTGCTCTCGCCGCCGCTCTTACGTCGATCATCGGCACCGCCGTGGTCAAGCCTCCGACAAGAGGCGAACCATCGTTGTTTCAGTTGACGTCGACGGGAACGACGAATAAAGGGAATGGATGTGGGACTAACTTTTTGAGCAATATTGCGGCGGCGACGGCGACGGCGACGAGTAATTCACCGCCGACTGGAAATATGGTGTTTGTTCCAGCGAGTTCGTCGCCGTTTTCGAATTCGAAGAGCGCGTCGGCGTCTCCAGATCTCTCTCTGTTTTTCCAGCTGCTTCTTACAGCAGTCTGCAAGTTTGGTTTGCCGGAGCTTAACATTTCGACAATGGGGAAGTCGCCAGGGAAATGGATTAAGACTATCTTGTTTGGGAAGAAGTCTTCCAAATCTAATCTTTCCAAGGGCAGAGAGAAAAATGGAAATGAGAAAGAAGTATTGGTTTCTGCCAAGGCATCAGGGGCTACTTCTGTTATTAGTCACCCTGTAGGTTCACATCCAACCTCAAGTGCCATTGATACAAATGAAGGGGTGTCAAAAATTACCAACAATGAGGCAGCTAATGCGTCGCATGAAAGATCAATATCAATTCCAGGAAATCAAGATGCAGAAATTCAAGGATCTGCTTGCCAAGATGCACCATCTGATCCTGAGAGCATCCGTAAAGAGGAGGCTGCAACGAAGGCTCAAGCTGCTTTTAGGGGTTATTTGGCTCGCCGAGCATTCCGGGCCCTCAAAGGTATTATTAGGTTGCAGGCACTTATTCGTGGTCACTTGGTAAGGAGACAGGCTGTTGCTACTCTATGTTGTATGCTTGGAATTGTTAAGTTTCAGGCTATTGCTCGGGGAAGAAGAGTGAGGCTTTCTGATGTAGGGTTTGAAGTGCAAAACAAATGTAGATTAGTGCAGCCACAGGAGCAATCATTAGTGGATCCTGCTGGAGTAAGTCTCTCTACACGGATGGCAAAGCTCTCTGCAAATACTTTCACTATCAAGCTTGCTTCATCTGCAACTGGAAAACCTCTGCAACTCTATTTTGATAACGAAGATGAAAACTCAGCCTTGAAGTGGTTAGAACGCTGGTCAAATTCTAGATTTTGGAAACCAATTCCCCAAGTAAAAAAAGCTCCAGAGTCTAAATCTCAAAGAAAGCTGAGCACTGGTCAAACTGGAGAGGCACCTACCGTTAGATCAAAACGCACAAGGAGAGTTCCCACTATAAACAATGACAGTGCCGCTGTCCAATCATCTGCAGAAGTTGAGAAACCCAAACGTACTTTTAGGAAAGTTTCAAGTCATTCAGCAGCAGAGCAGGTTCAGGAGAATCCTCAGATGGAGCTTGAAAAGGTCAAGCGTAGTCTGAGAAAGGTCCATAATCCTGTCCTTGAGAATTCTGCCCCAACCGAAGCAGATACTGAGAAGCCCAAGGAAAGTTTGGACAAGGCTTCTAATGGTCTAGGCCGTGACCTTTCGGCAAGAGGTACCAGTAATTCTTCTGAGAAGATGAAAAAAGAGGCAATCTCAACGATACCCGTCCAGCCTGATTTGGAAACAACTCCTGAGCCGTTACCGATAAAAGAGGTACTTAATGTACCTAATGGTGATCCAATTGTAGATTCACAGCTTTTGATTGAGAGCAGTGACAGAGATAAGAGCATTGCTGGAGATGAGGCTGCTGTGGAAACTAAGCCTTTTACAGAGAGCTACCCTAAAGATGATATCAACCCATTATCGAATGGGGAATCAAACCACAAGGAAGATTATACTAACAACGAGAACCTGAAATCTGGCAGGAAAGCCTCTACTCCAGCCAAGCAAGAGCGAGTAGAGAATGGGTTGCAACATAGTCCTACCGTACCAAGCTACATGGCAGCAACTGAATCTGCAAAGGCAAAACTGAGAGCACAAGGATCTCCAAGATTTGGACAGGATAGTGGTGAAAAAAATAACCTCAACCGACGACATTCTTTACCGTCGCCCATTAATGCTAAAATTAGCTCACAGTCTCCACGAACACAAAGACTTGTTCAAGCAGGTGGCAAAGGAGGAAATAAAAATGACAAGGCTCCTCTGGGATCAAGAGATGGAAATGGAAAGGTAGTCCAAGCAGACTGGAGAAGGTAA 3594 45.83 MEAANVFGRLRPVVKTEKPAGDGDGDGDGDNSPSKQRLLVKEDQLESTRAEMGEVREENQRLKTSLNQIMKDYEALRMQFLGIVGGDMKKIPQVDDKSNNEQHNDDQTDETELISLTLGRFPMTEKNKKATDKKDKTNMSSQGREIIGDGQVVKESLSLGLNCKFERESTIVKEVDSLNRSLTNSLDHEAKEEAGETTWPPSKGTKTMRSDDDDVTPQNPPKRARVCVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTGSPTCPVRKQVQRCADDMSILITTYEGTHNHQLPVSATAMASTTSAAASMLLSGSSSSTAPNPSSSTNLHGLNFYPNSNKLSNHNFYLPNSSINSSTSPTITLDLTSNSSSSSISTSSHFGKFPSTFANSRYPFTSQLDFGSSRNNVLSWNNGLFSYNRNNNPTATTNNIYQNYIQQQQRNNNLNHHNNVVSAAAATSLSHQPQQPLPDTIAAATKAITADPSFQSALAAALTSIIGTAVVKPPTRGEPSLFQLTSTGTTNKGNGCGTNFLSNIAAATATATSNSPPTGNMVFVPASSSPFSNSKSASASPDLSLFFQLLLTAVCKFGLPELNISTMGKSPGKWIKTILFGKKSSKSNLSKGREKNGNEKEVLVSAKASGATSVISHPVGSHPTSSAIDTNEGVSKITNNEAANASHERSISIPGNQDAEIQGSACQDAPSDPESIRKEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMLGIVKFQAIARGRRVRLSDVGFEVQNKCRLVQPQEQSLVDPAGVSLSTRMAKLSANTFTIKLASSATGKPLQLYFDNEDENSALKWLERWSNSRFWKPIPQVKKAPESKSQRKLSTGQTGEAPTVRSKRTRRVPTINNDSAAVQSSAEVEKPKRTFRKVSSHSAAEQVQENPQMELEKVKRSLRKVHNPVLENSAPTEADTEKPKESLDKASNGLGRDLSARGTSNSSEKMKKEAISTIPVQPDLETTPEPLPIKEVLNVPNGDPIVDSQLLIESSDRDKSIAGDEAAVETKPFTESYPKDDINPLSNGESNHKEDYTNNENLKSGRKASTPAKQERVENGLQHSPTVPSYMAATESAKAKLRAQGSPRFGQDSGEKNNLNRRHSLPSPINAKISSQSPRTQRLVQAGGKGGNKNDKAPLGSRDGNGKVVQADWRR 1197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67198609 67213377 + Hsped.07g22870.1 Hepe07g2287 575682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2287 1197 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 1097 1113 - -
Hepe07g2287 1197 ProSiteProfiles IQ motif profile. 736 758 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 1132 1165 - -
Hepe07g2287 1197 Gene3D - 710 759 - -
Hepe07g2287 1197 Pfam IQ calmodulin-binding motif 714 733 IPR000048 GO:0005515(InterPro)
Hepe07g2287 1197 Pfam IQ calmodulin-binding motif 736 753 IPR000048 GO:0005515(InterPro)
Hepe07g2287 1197 SUPERFAMILY WRKY DNA-binding domain 230 298 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g2287 1197 Pfam WRKY DNA -binding domain 238 296 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 979 994 - -
Hepe07g2287 1197 Pfam Protein of unknown function (DUF4005) 1079 1172 IPR025064 -
Hepe07g2287 1197 SMART iq_5 711 733 IPR000048 GO:0005515(InterPro)
Hepe07g2287 1197 SMART iq_5 734 755 IPR000048 GO:0005515(InterPro)
Hepe07g2287 1197 SMART WRKY_cls 237 297 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g2287 1197 ProSiteProfiles IQ motif profile. 712 740 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 15 59 - -
Hepe07g2287 1197 Coils Coil 38 79 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 862 935 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 1 59 - -
Hepe07g2287 1197 FunFam probable WRKY transcription factor 31 222 299 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 183 222 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 947 1197 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 959 973 - -
Hepe07g2287 1197 MobiDBLite consensus disorder prediction 872 906 - -
Hepe07g2287 1197 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 502 IPR044810 GO:0003700(InterPro)
Hepe07g2287 1197 Gene3D WRKY domain 222 299 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0482 Hepe-Chr7:4957862 Hepe07g2287 Hepe-Chr7:67198609 9.01e-43 dispersed
Hepe07g2287 Hepe-Chr7:67198609 Hepe10g1775 Hepe-Chr10:54519892 1.07e-19 dispersed
Hepe05g0226 Hepe-Chr5:2673098 Hepe07g2287 Hepe-Chr7:67198609 6.76e-16 wgd
Hepe07g2287 Hepe-Chr7:67198609 Hepe09g0135 Hepe-Chr9:1069494 2.54e-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56035 PF13178 DUF4005 5.00E-19 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2287 - - - 0.0