Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2308 | ATGCCGCCGAGACGATATGCTGTTGGAAGGGCTGATGAGGCCACCCACCCTGACTCCATTAGAGCCACCTTGGCTGAGTTCATTTCCACTTTCATCTTCGTCTTCGCCGGCGAAGGCTCCGTCCTCGCTCTTGATAAAATTATGAGGCCAGCTGATTATGGAAGTTACGGTCGTGGAGGTTACGGTTATGGTGGTCACGATCACGGTTACGGTCGGAGGGGGGCCGACACGGGCCGAGGGGCGTCAGACTTGGTGGTAATAGCGATAGCGCATGCATTTGCACTGTTCTCGGCGGTTGCGGCGAGTATCAACGTCTCCGGCGGGCATGTGAATCCTGCAGTGACTTTTGGTGCACTTCTTGGAGGGAGGATCTCTCTTATCCGTGCATTCTTCTATTGGATTGCTCAGATCTTGGGTGCTATCGTTGCTTCACTTCTCTTGAGACTCTCAACCGGTGGAATGAGGCCTATGGGGTTCTTTGTATCATCAGGAATATCGGAACTGCACGGATTTCTACTAGAGATAGTGCTTACATTCGCTTTGGTGTACACAGCCTACGCAACATCAATAGATCCAAAGAGGGGCAGTTTGGGAACAATAGCACCACTGGCAATCGGGTTAATGGTCGGGGCGAATATTCTGGTGGGCGGGGCGTTCGATGGGGCGTGCATGAACCCGGCCCGAGCATTTGGGCCGTCTTTAGTGGGCTGGAGATGGGACAACCATTGGATTTACTGGATCGGCCCATTAATCGGAGGTGGGCTTGCTGCGCTTGTGTATGAGTACTTGGTCATTCCAGTTGAACCTCCTCTGCATACCCACCAGCCCTTAGCTCCTGAAGATTACTAA | 849 | 52.89 | MPPRRYAVGRADEATHPDSIRATLAEFISTFIFVFAGEGSVLALDKIMRPADYGSYGRGGYGYGGHDHGYGRRGADTGRGASDLVVIAIAHAFALFSAVAASINVSGGHVNPAVTFGALLGGRISLIRAFFYWIAQILGAIVASLLLRLSTGGMRPMGFFVSSGISELHGFLLEIVLTFALVYTAYATSIDPKRGSLGTIAPLAIGLMVGANILVGGAFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLIGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 67404886 | 67406957 | - | Hsped.07g23080.1 | Hepe07g2308 | 575703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2308 | 282 | NCBIfam | MIP family channel protein | 25 | 260 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | FunFam | Probable aquaporin TIP1-1 | 66 | 278 | - | - | |
Hepe07g2308 | 282 | CDD | MIP | 21 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | Gene3D | Glycerol uptake facilitator protein. | 5 | 268 | IPR023271 | - | |
Hepe07g2308 | 282 | PANTHER | AQUAPORIN-8 | 5 | 272 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Hepe07g2308 | 282 | SUPERFAMILY | Aquaporin-like | 13 | 273 | IPR023271 | - | |
Hepe07g2308 | 282 | PRINTS | Major intrinsic protein family signature | 128 | 147 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | PRINTS | Major intrinsic protein family signature | 243 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe07g2308 | 282 | ProSitePatterns | MIP family signature. | 109 | 117 | IPR022357 | - | |
Hepe07g2308 | 282 | Pfam | Major intrinsic protein | 14 | 260 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g2308 | Hepe-Chr7:67404886 | Hepe10g0358 | Hepe-Chr10:3917491 | 5.17e-71 | dispersed | |
Hepe07g2308 | Hepe-Chr7:67404886 | Hepe04g0977 | Hepe-Chr4:64216315 | 4.15e-101 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2308 | K09873 | - | csv:101208863 | 488.419 |