Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2308 ATGCCGCCGAGACGATATGCTGTTGGAAGGGCTGATGAGGCCACCCACCCTGACTCCATTAGAGCCACCTTGGCTGAGTTCATTTCCACTTTCATCTTCGTCTTCGCCGGCGAAGGCTCCGTCCTCGCTCTTGATAAAATTATGAGGCCAGCTGATTATGGAAGTTACGGTCGTGGAGGTTACGGTTATGGTGGTCACGATCACGGTTACGGTCGGAGGGGGGCCGACACGGGCCGAGGGGCGTCAGACTTGGTGGTAATAGCGATAGCGCATGCATTTGCACTGTTCTCGGCGGTTGCGGCGAGTATCAACGTCTCCGGCGGGCATGTGAATCCTGCAGTGACTTTTGGTGCACTTCTTGGAGGGAGGATCTCTCTTATCCGTGCATTCTTCTATTGGATTGCTCAGATCTTGGGTGCTATCGTTGCTTCACTTCTCTTGAGACTCTCAACCGGTGGAATGAGGCCTATGGGGTTCTTTGTATCATCAGGAATATCGGAACTGCACGGATTTCTACTAGAGATAGTGCTTACATTCGCTTTGGTGTACACAGCCTACGCAACATCAATAGATCCAAAGAGGGGCAGTTTGGGAACAATAGCACCACTGGCAATCGGGTTAATGGTCGGGGCGAATATTCTGGTGGGCGGGGCGTTCGATGGGGCGTGCATGAACCCGGCCCGAGCATTTGGGCCGTCTTTAGTGGGCTGGAGATGGGACAACCATTGGATTTACTGGATCGGCCCATTAATCGGAGGTGGGCTTGCTGCGCTTGTGTATGAGTACTTGGTCATTCCAGTTGAACCTCCTCTGCATACCCACCAGCCCTTAGCTCCTGAAGATTACTAA 849 52.89 MPPRRYAVGRADEATHPDSIRATLAEFISTFIFVFAGEGSVLALDKIMRPADYGSYGRGGYGYGGHDHGYGRRGADTGRGASDLVVIAIAHAFALFSAVAASINVSGGHVNPAVTFGALLGGRISLIRAFFYWIAQILGAIVASLLLRLSTGGMRPMGFFVSSGISELHGFLLEIVLTFALVYTAYATSIDPKRGSLGTIAPLAIGLMVGANILVGGAFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLIGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67404886 67406957 - Hsped.07g23080.1 Hepe07g2308 575703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2308 282 NCBIfam MIP family channel protein 25 260 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 FunFam Probable aquaporin TIP1-1 66 278 - -
Hepe07g2308 282 CDD MIP 21 263 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 Gene3D Glycerol uptake facilitator protein. 5 268 IPR023271 -
Hepe07g2308 282 PANTHER AQUAPORIN-8 5 272 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Hepe07g2308 282 SUPERFAMILY Aquaporin-like 13 273 IPR023271 -
Hepe07g2308 282 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 PRINTS Major intrinsic protein family signature 243 263 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2308 282 ProSitePatterns MIP family signature. 109 117 IPR022357 -
Hepe07g2308 282 Pfam Major intrinsic protein 14 260 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2308 Hepe-Chr7:67404886 Hepe10g0358 Hepe-Chr10:3917491 5.17e-71 dispersed
Hepe07g2308 Hepe-Chr7:67404886 Hepe04g0977 Hepe-Chr4:64216315 4.15e-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2308 K09873 - csv:101208863 488.419