Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2321 ATGGAGGATAAAGGAGTCGAGGATCGTGTAGTGAAGCGCTTGGATTCTGATCGCGATCCTAATCAGAAGAGCAGGCAGAGTTTTGGAGGAGTAGGTGGTGGAGTTTGTGGAGTATTATCGATCGAGGAGTTCTTTGAGGATCAAGAAGTTCCTTCATGGAGGAAGCAGCTGACATTTAGAGCTTTTTTCGTTAGTTTTTGGCTGAGCATTTTGTTCAGCTTCATTGTTATGAAGCTCAATCTGACCACTGGTATTATACCTTCACTCAACGTATCTGCTGGTTTATTAGGGTTCTTCTTTGTCAAATCATGGACGAAATTCTTGGAGAGATCGGGCTTCTTGAGGCAGCCTTTCACCAGGCAGGAGAACACCGTCATCCAAACCTGCGTTGTTGCCTCTTCTGGCATCGCTTTCAGCGGAGGTTTTGGAAGTTACTTATTTGGAATGAGCGAACGGATTGCTCATAAATCATCAGGCAGTAAAGATTTCAAAGATCCATCATTAGGATGGATGATTGGTTTTCTATTTGTTGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCCTTGCGAAAGATCATGGTCATAGACTTCAAATTAAGTTATCCAAGTGGTACTGCAACTGCTCATTTGATTAATAGTTTTCATACTCCCCGAGGAGCTGCACTAGCAAAGAAACAGGTGAGATTGCTTGGCAGGTTTTTCTCCGTGAGCTTCTTGTGGGGCTTTTTTCAATGGTTCTTTACAGCTGCCGATGGTTGTGGATTTGCACATTTTCCAACATTTGGGCTCAAAGCATATGCAAACAGGTTTTACTTCGACTTCTCAGCAACATATATTGGAGTTGGGATGATTTGCCCCCACATAATAAATGTATCTGTGCTTGTTGGAGGAATTATCTCTTGGGGCATAATGTGGCCTCTCATAGAAGATAAAAAAGGTCAATGGTATAGTGAGAAATTGAGCTCAGATGACCTAAGTGGACTTGAAGGTTACAAGGTATTTATAGCAATAGCCATAATTCTTGGTGATGGCCTGTACAACTTCTTCAAAGTATTGACTCGGACTCTCTCCGGCTTGTTCTACCAACTTCACAAAAGAGAGACTGAAGATTTTTCCTTGGAAAATTCATCAAGGTCTGAGTTATCTTATGATGATGAACGAAGAAAACACCTTTTTCTCAAGGATCAAATACCAATCTGGCTTGCCATTGGAGGCTATGTCGTAATTGCTGCAGTGTCGATTAACACTCTTCCACACATCTTTACCCAGCTGAAGTGGTATTATATTTTGGTCATCTACATCTTTGCTCCTGTTTTGGCCTTCTGTAATGCATATGGATGTGGACTCACAGATTGGTCTCTAGCATCCACTTATGGAAAGCTTGCCATTTTTACGATTGGTGCGTGGGCTGGGCCTTTGCACGGAGGAGTTATCGCTGGTCTATCGGCTTGCGGGGTCATGATGAATATTGTCTCCACAGCCTCTGACCTAATGCAAGATTTCAAGACTGGCTATCTAACTTTGGCTTCGCCTCGCTCCATGTTTGTCAGCCAAGTAGTAGGCACAACAATGGGCTGCATTATTTCACCTTGTGTCTTCTGGCTCTTTTACAAGGCATTTAATGATCTTGGCCTTCCATCTGGTGAATACCCCGCCCCTAACGCAGTTCTTTTCCGAAACATGTCTGTGTTGGGTGTTGAAGGCGTCTCAAGTCTACCAAAGAATTGCCTTACCTTTTGTTATGTTTGTTTTGCCATCTCCATTTTGATTAACTTGATTAAAGACTTGATACCAAAAAAGTGGGCAAGGTTCATTCCCTTACCTATGGCAATGGCAATACCATTCTATATAGGGCCATACTTTGCAATTGACATGAGCCTTGGAAGTCTGATATTATTTGTGTGGCAGAAGTTAAACAAAACCAAGGCCGATGCCTTCGGTCCAGCTGTAGCGTCGGGTTTGATATGTGGGGACGGGATGTGGACGTTGCCTAATTCGATTTTGGCTTTGGCGGGAGTCCAGCCACCGATGTGCATGAAGTTCCTATCAAGGGCAACCAACACAAGAGTAGATAAGTTCTTAAAACCGTAG 2091 43.19 MEDKGVEDRVVKRLDSDRDPNQKSRQSFGGVGGGVCGVLSIEEFFEDQEVPSWRKQLTFRAFFVSFWLSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKSWTKFLERSGFLRQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSERIAHKSSGSKDFKDPSLGWMIGFLFVVSFLGLFSVVPLRKIMVIDFKLSYPSGTATAHLINSFHTPRGAALAKKQVRLLGRFFSVSFLWGFFQWFFTAADGCGFAHFPTFGLKAYANRFYFDFSATYIGVGMICPHIINVSVLVGGIISWGIMWPLIEDKKGQWYSEKLSSDDLSGLEGYKVFIAIAIILGDGLYNFFKVLTRTLSGLFYQLHKRETEDFSLENSSRSELSYDDERRKHLFLKDQIPIWLAIGGYVVIAAVSINTLPHIFTQLKWYYILVIYIFAPVLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPLHGGVIAGLSACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFNDLGLPSGEYPAPNAVLFRNMSVLGVEGVSSLPKNCLTFCYVCFAISILINLIKDLIPKKWARFIPLPMAMAIPFYIGPYFAIDMSLGSLILFVWQKLNKTKADAFGPAVASGLICGDGMWTLPNSILALAGVQPPMCMKFLSRATNTRVDKFLKP 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67542858 67547855 + Hsped.07g23210.1 Hepe07g2321 575716

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2321 696 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 40 685 IPR045035 GO:0016020(PANTHER)|GO:0035673(InterPro)
Hepe07g2321 696 MobiDBLite consensus disorder prediction 1 29 - -
Hepe07g2321 696 NCBIfam OPT family oligopeptide transporter 53 669 IPR004813 GO:0035673(InterPro)
Hepe07g2321 696 Pfam OPT oligopeptide transporter protein 56 668 IPR004813 GO:0035673(InterPro)
Hepe07g2321 696 MobiDBLite consensus disorder prediction 1 22 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2321 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3435 Hepe-Chr2:83717082 Hepe07g2321 Hepe-Chr7:67542858 0.0 dispersed
Hepe07g0037 Hepe-Chr7:435755 Hepe07g2321 Hepe-Chr7:67542858 2.21e-261 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g954 . . . . . . . . . Cmo18g00078 . . . . . Cpe20g00180 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed08g2805 . . Cma13g00959 Cma18g00101 Car13g00795 Car18g00091 . . Bhi08g01350 Tan05g2138 Cmetu04g2126 Lac10g0326 Hepe07g2321 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001400 2 2 2 3 2 2 3 2 2 3 2 2 3 3 3 3 2 1 3 2 3 2 2 1 2 3 2 6 4 2 74