Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2336 ATGGCTCTGGTTCGTGATCGCCGCCAGTTAAACCTCCGCCTCCCCGACCTCTCCGACTGCCGTCCCCGCTTCCCTCTCCCCCTCCCTCCATCCTCCTCCGCCGCAGCACCTCCCTCCGCCTCCGCCTCTGCCGCCGCTCCCCCCGCCATCTCCTCCTCCGACCTCGACAAACTCCAAGTCCTCGGCCACGGCAACGGCGGCACCGTCTACAAAGTCCACCACAAGCGCACCTCCGCCACCTACGCTCTCAAGGTCGTCCACGGCGACTGCGATCCCACCGTTCGCCGTCAGGTCTTCAGAGAGATGGAGATCCTCCGCCGTACGGACTCTCCCTACGTCGTCCAGTGCCATGGAATCTTCGAGAAGCCGTCTGGAGATGTCACGATTTTGATGGAGTATATGGATCTAGGATCGCTCGATTCACTCTTGAAGAAGAACTCCACGTTGCCGGAAGCGACTCTCGCTCACGTCTCGCGTCAGGTTCTTAACGGCCTTCACTATCTTCACTCTCACAAAATCATTCATCGCGATATTAAACCGTCGAATCTGTTGGTGAATAAGAATATGGAGGTTAAAATCGCCGATTTCGGAGTGAGTAAAATCATGTGCAGGACTCTGGATGCTTGCAATTCCTACGTCGGAACCTGCGCTTATATGAGTCCAGAGCGGTTCGATCCGGAGACTTACGGCGGAAATTACAACGGTTACGCCGGCGACATATGGAGTTTGGGGCTAACTCTTCTCGAGCTCTATTTAGGCCATTTTCCTTTTCTTCCGGCTGGTCAGAGACCGGATTGGGCGACTCTGATGTGTGCGATTTGCTTCGGCGAACCGCCGACGCTGCCGGAGGATGCGTCGGAGGAGTTTCGTAGCTTCGTCGAGTGTTGTTTGCAGAAGGAATCGAGTAAGAGGTCGACGGCGGCGCAATTGTTGACGCATCCATTTGTGTGCAAGGAATCGAGATCCGATCGGTGA 975 56.1 MALVRDRRQLNLRLPDLSDCRPRFPLPLPPSSSAAAPPSASASAAAPPAISSSDLDKLQVLGHGNGGTVYKVHHKRTSATYALKVVHGDCDPTVRRQVFREMEILRRTDSPYVVQCHGIFEKPSGDVTILMEYMDLGSLDSLLKKNSTLPEATLAHVSRQVLNGLHYLHSHKIIHRDIKPSNLLVNKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPETYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPAGQRPDWATLMCAICFGEPPTLPEDASEEFRSFVECCLQKESSKRSTAAQLLTHPFVCKESRSDR 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67729766 67731164 + Hsped.07g23360.1 Hepe07g2336 575731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2336 324 FunFam Mitogen-activated protein kinase kinase 29 131 - -
Hepe07g2336 324 SUPERFAMILY Protein kinase-like (PK-like) 54 318 IPR011009 -
Hepe07g2336 324 Gene3D Phosphorylase Kinase; domain 1 38 135 - -
Hepe07g2336 324 CDD PKc_MAPKK_plant_like 54 316 - -
Hepe07g2336 324 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524(InterPro)
Hepe07g2336 324 ProSiteProfiles Protein kinase domain profile. 55 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2336 324 Gene3D Transferase(Phosphotransferase) domain 1 137 324 - -
Hepe07g2336 324 SMART serkin_6 55 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2336 324 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 49 319 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Hepe07g2336 324 Pfam Protein kinase domain 57 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2336 324 FunFam Mitogen-activated protein kinase 2 136 324 - -
Hepe07g2336 324 MobiDBLite consensus disorder prediction 17 48 - -
Hepe07g2336 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1587 Hepe-Chr2:21058760 Hepe07g2336 Hepe-Chr7:67729766 8.68e-100 dispersed
Hepe07g2336 Hepe-Chr7:67729766 Hepe08g2630 Hepe-Chr8:68262406 1.27e-66 dispersed
Hepe07g2336 Hepe-Chr7:67729766 Hepe08g2677 Hepe-Chr8:68806504 7.35e-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72992 PF00069 Pkinase 5.40E-65 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2336 K20604 - csv:101203133 577.015