Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2340 ATGCAAACCCAGATGAGAATTCCTTTCCTCTCTCTGTTTCTTCTGGGTTTCTCTCTTCTACTCTCCACTGTCAAACCAGATCTTGCTTCTGATACAGCAGCTCTTTTCGCCCTTCGTTCCGCCGTCGGTGGCCGAACTCTTCTCCTCTGGAATGTCACTGATCAGACCCGCCCCTGTTCTTGGCCTGGGATTCGTTGCGAGGACAATCGTGTCACTGTTCTTCGTCTTCCCGGCGCCGCGCTTTCCGGTCAATTACCCGCCGGAATTTTCGGGAACTTGACTCACCTTCGCACTCTCAGCCTTCGACTCAACGCCCTTTCCGGTCAGCTCCCGGCAGATCTCTCCGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTGTCCCTGATTTCTTGTTCCAGCTTCATGACCTTGTTCGTCTTAATTTGGCCTCCAATAACTTTTCTGGGGAGATCTCTTTAGGGTTCAACAATTTGACCCGTCTTAGGACTCTGTTTCTAGAAAACAATCACCTCTCTGGGTCTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAATGTTTCCAACAATCAGTTAAATGGGTCGGTTCCAAAGGGAATGCAGTCGTTTTCTACGAATTCGTTTTTGGGAAATTCTCTCTGTGGGCGTCCTCTTGAGGCTTGCTCGGATGATCTTTCTGTGCCGACAGGGGACGTTGGGGACAATGGCGGCTCTGGACACAAGAAAAAGCTGTCGGGAGGAGCCATTGCTGGGATTGTCATTGGATCTGTACTGGGTTTTGTGTTGTTACTTGTAATCTTAATGCTTTTGTGCAGAAAGAAGAGTGCTCAGAAAACGAGTTCAGTGGATGTAGCCACAGTGAAGAATCCTGAAGTGGAAATTCAGGTCGGTAAGTCAGCTGGGGAGATTGAAAATGGCGGTTACAGTAATGGTTATTCTACTGTGCCAGCCACTGCTGCTACAGCTGCAACAGTGGCGGCAGCGGCCGGGACTGCAAAGGGGGAAGTGAATGCCAATGGAACTGGCGCTAAGAAATTGGTGTTTTTTGGTAATGCTGCAAGAGTATTTGATTTGGAGGATCTTTTGAGAGCTTCAGCTGAAGTGTTGGGGAAAGGAACTTTTGGGACTGCTTACAAAGCAGTTCTGGAAGTGGGTTCTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACCATAACAGAGCAGGAATTCAGAGAGAAGATTGAAGCTGTTGGATCTATGAATCATGAAAATTTGGTCCTTCTCAGGGCTTACTATTTCAGTAGGGATGAGAAGCTTCTTGTCTTTGATTACATGGCCATGGGAAGCTTATCTGCTCTTTTACATGGAAGCAAAGGAGCTGGTAGGACTCCATTGAATTGGGAAATCAGGTCTGGAATAGCCCTTGGAGCTGCTCGTGGCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACCAAATCCTATGATGCTCGAGTCTCCGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCAGCCCCAACAGAGTTGCTGGATACCGTGCACCGGAGGTCACTGATCCTCGTAAAGTATCCCATAAGGCAGATGTCTATAGCTTTGGCGTATTGCTCTTGGAGCTTTTGACAGGAAAGGCTCCTACCCACTCCCTTCTAAACGAGGAAGGAGTCGATTTACCCAGATGGGTGCAGTCAGTTGTTAGGGAGGAGTGGACTTCCGAAGTTTTCGACCTCGAGCTTCTTAGGTACCAAAACGTCGAGGAGGAGATGGTTCAACTATTGCAGCTTGCAGTCGATTGCGCAGCTCAGTATCCTGATAAGCGTCCCAATATGTCCGAAGTCACAAAGCGTATCGAAGAGCTTCGCCAATCCAGCCTTCACGAAGTACATCCACAACTCGACGCTGCTCATGATTCAGACGACGCGTCTTCTAGGTGA 1992 47.99 MQTQMRIPFLSLFLLGFSLLLSTVKPDLASDTAALFALRSAVGGRTLLLWNVTDQTRPCSWPGIRCEDNRVTVLRLPGAALSGQLPAGIFGNLTHLRTLSLRLNALSGQLPADLSACINLRNLYLQGNEFSGLVPDFLFQLHDLVRLNLASNNFSGEISLGFNNLTRLRTLFLENNHLSGSIPDLKIPLDQFNVSNNQLNGSVPKGMQSFSTNSFLGNSLCGRPLEACSDDLSVPTGDVGDNGGSGHKKKLSGGAIAGIVIGSVLGFVLLLVILMLLCRKKSAQKTSSVDVATVKNPEVEIQVGKSAGEIENGGYSNGYSTVPATAATAATVAAAAGTAKGEVNANGTGAKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGSVVAVKRLKDVTITEQEFREKIEAVGSMNHENLVLLRAYYFSRDEKLLVFDYMAMGSLSALLHGSKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPPSSPNRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPNMSEVTKRIEELRQSSLHEVHPQLDAAHDSDDASSR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67769684 67773164 + Hsped.07g23400.1 Hepe07g2340 575735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2340 663 CDD STKc_IRAK 376 639 - -
Hepe07g2340 663 FunFam Probable inactive receptor kinase At1g48480 445 647 - -
Hepe07g2340 663 Pfam Protein kinase domain 374 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2340 663 Gene3D Transferase(Phosphotransferase) domain 1 445 660 - -
Hepe07g2340 663 FunFam Probable inactive receptor kinase RLK902 28 186 - -
Hepe07g2340 663 Gene3D Ribonuclease Inhibitor 189 229 IPR032675 -
Hepe07g2340 663 ProSiteProfiles Protein kinase domain profile. 370 651 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2340 663 MobiDBLite consensus disorder prediction 642 663 - -
Hepe07g2340 663 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Hepe07g2340 663 SUPERFAMILY L domain-like 32 210 - -
Hepe07g2340 663 FunFam pollen receptor-like kinase 1 339 444 - -
Hepe07g2340 663 SUPERFAMILY Protein kinase-like (PK-like) 374 647 IPR011009 -
Hepe07g2340 663 Gene3D Ribonuclease Inhibitor 29 186 IPR032675 -
Hepe07g2340 663 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Hepe07g2340 663 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524(InterPro)
Hepe07g2340 663 PANTHER OS05G0588300 PROTEIN 6 656 IPR050994 -
Hepe07g2340 663 Pfam Leucine Rich Repeat 119 141 IPR001611 GO:0005515(InterPro)
Hepe07g2340 663 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515(InterPro)
Hepe07g2340 663 Pfam Leucine Rich Repeat 167 184 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2340 Hepe-Chr7:67769684 Hepe08g2570 Hepe-Chr8:67362052 3.49e-147 dispersed
Hepe02g1001 Hepe-Chr2:12270237 Hepe07g2340 Hepe-Chr7:67769684 4.13e-203 transposed
Hepe02g2407 Hepe-Chr2:69734346 Hepe07g2340 Hepe-Chr7:67769684 2.25e-158 transposed
Hepe07g2573 Hepe-Chr7:70213294 Hepe07g2340 Hepe-Chr7:67769684 4.26e-96 transposed
Hepe07g2574 Hepe-Chr7:70214264 Hepe07g2340 Hepe-Chr7:67769684 1.45e-114 transposed
Hepe02g3118 Hepe-Chr2:80336980 Hepe07g2340 Hepe-Chr7:67769684 1.92e-65 transposed
Hepe07g2340 Hepe-Chr7:67769684 Hepe09g0414 Hepe-Chr9:3727277 3.26e-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72993 PF00069 Pkinase 3.90E-39 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2340 - - - 0.0