Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2353 ATGGGGGAATCACCAAAAAGTCCAGAGAGCGGCAGCACTACTACTGGAGGAGGCTCTTCTTCTTCTTCCTTAATGGAAAGCTTATTAGGTCTTCTTCGTATTCGGATCATTCGCGGCGTCAACCTCGCCGTTCGCGACGTTCGCAGCAGCGATCCTTACATTGTCGTTAAAATGGCCAAACAGAAATTGAAGACTCGTGTGATTAAGAAGGACATCAATCCAGAATGGAACGAGGACCTTACTCTTTCTGTTACAGACTCCAACACTTCAGTCAAGCTGACGGTGTTCGACCACGACACGTTTAGCATGGACGACAAGATGGGAGATGCGGAATTCGAGATAGGGCCATACATAGAAGCTCTGAAGATGAATATGACAGGGCTACCAAGTGGAACCGTAGTGTCAAGAGTTCAACCAAGCAGGCAAAATTGCCTTGCGGAAGAGAGTGCCATTGTGTGGTGGGAAGGCAAAATTATTCAAAACATTTGCCTCCGCTTACGCAATGTCGAATGTGGCGAAGTCGAAATCCAGTTGCAATGGATCGATCTTCCTGGCTCTAAAGGTTTGTAA 570 47.02 MGESPKSPESGSTTTGGGSSSSSLMESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKMAKQKLKTRVIKKDINPEWNEDLTLSVTDSNTSVKLTVFDHDTFSMDDKMGDAEFEIGPYIEALKMNMTGLPSGTVVSRVQPSRQNCLAEESAIVWWEGKIIQNICLRLRNVECGEVEIQLQWIDLPGSKGL 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67880684 67882505 - Hsped.07g23530.1 Hepe07g2353 575748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2353 189 ProSiteProfiles C2 domain profile. 16 130 IPR000008 -
Hepe07g2353 189 Pfam C2 domain 30 116 IPR000008 -
Hepe07g2353 189 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 122 IPR035892 -
Hepe07g2353 189 Gene3D C2 domain 26 187 IPR035892 -
Hepe07g2353 189 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 25 187 IPR044562 -
Hepe07g2353 189 MobiDBLite consensus disorder prediction 1 22 - -
Hepe07g2353 189 CDD C2_ArfGAP 33 172 - -
Hepe07g2353 189 SMART C2_3c 31 126 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0547 Hepe-Chr1:64949248 Hepe07g2353 Hepe-Chr7:67880684 4.47e-68 dispersed
Hepe07g1714 Hepe-Chr7:58986660 Hepe07g2353 Hepe-Chr7:67880684 1.40e-41 dispersed
Hepe02g1016 Hepe-Chr2:12515958 Hepe07g2353 Hepe-Chr7:67880684 2.47e-84 transposed
Hepe02g2647 Hepe-Chr2:73966681 Hepe07g2353 Hepe-Chr7:67880684 9.66e-77 wgd
Hepe07g2353 Hepe-Chr7:67880684 Hepe09g0393 Hepe-Chr9:3530798 2.12e-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2353 - - - 0.0