Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2356 ATGTGGATGATGGGTTACAATGACGGCGGAGCTGATTTGAACTTTGCTTCTGATTCATTCAATAATAATGGTCGGAAACTTAGGCCTCTCATTCCTCGCCCTCTCTCTTCTCTTTCCACCGCCACTTCTAATTCTTCTTCCACCTCTATTAATCCTCCTTTAAACCTTATCCACACCAACGATTTCTTCTCTCAATTTCATCACATGGCGACGGTGACTGATCCTACCAAGAGGGAGTTGAGTAATGCGCCGCCGCCGGTGGTGGTGAGCTCTCGGTGGAATCCAACGCCGGAGCAGTTGAGGGTTTTGGAAGAATTGTACCGGCGGGGGACTCGAACCCCGTCCGCCGATCAAATTCAACATATCACGGCGCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAAAATGTGTTCTACTGGTTTCAGAATCATAAAGCAAGAGAGCGGCAGAAACGCCGACGGCAGATGGAATCCGCCGACCACTCGCCTCGCGATATCGAAAACCTCGAAAGGAAGGATTCAGGGTCGGGAAGGACAGTCTATGAAGTTGAACAGACCAAAAACTGGGCGCCCTCTACAAACTGCAGTACACTTGTGGAGGAATCTGTTCCAATTCAACGGGCGGCAAAAGCTAGTCTAAGGGCAGCAGCAGATTGCAGGACAGAAAATGGATGGATCCAATTTGAGGAATTGCACCAAAGAAGGAATAACAACAACAACTTTGCTGAAAAGAATAGTAATAACATTCTCATCAACAACAATAATAACAATGCAGCCTCCTTGCAATTGATGCATTGTCCGGCGGCGGTTCTCGGAGGCGGAAGCGGTGGCCAGCTGATGATGAACACCGCCCCCATCACCACCACAGCCATAGTTACAACAATAATGCATCAAAAATCTCATAGTAATATTTCAGCCTTTGTTGGATCCTATACACAAAATGGAGTTGAAGAATTAGAAGAAGAATTAGATGAAGAATTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGGATGTGGGGAATCTGAAACCCTACAACTTTTTCCTTTGTGCAGTGAGACAAGAAATGGTAAGATTATTGGAGGAAAAAATGGATGTGAAACAGTGGAAAATTCAGGGATGAATAGTACTAATCTGACTCCACTTCAATTCTTTGAATTCCTTCCATTGAAGAATTGA 1185 44.98 MWMMGYNDGGADLNFASDSFNNNGRKLRPLIPRPLSSLSTATSNSSSTSINPPLNLIHTNDFFSQFHHMATVTDPTKRELSNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESADHSPRDIENLERKDSGSGRTVYEVEQTKNWAPSTNCSTLVEESVPIQRAAKASLRAAADCRTENGWIQFEELHQRRNNNNNFAEKNSNNILINNNNNNAASLQLMHCPAAVLGGGSGGQLMMNTAPITTTAIVTTIMHQKSHSNISAFVGSYTQNGVEELEEELDEELEEEEEEEEEGEEGCGESETLQLFPLCSETRNGKIIGGKNGCETVENSGMNSTNLTPLQFFEFLPLKN 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67936044 67938635 + Hsped.07g23560.1 Hepe07g2356 575751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2356 394 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 83 390 IPR044555 GO:0003700(InterPro)|GO:0099402(InterPro)
Hepe07g2356 394 SUPERFAMILY Homeodomain-like 90 157 IPR009057 -
Hepe07g2356 394 ProSiteProfiles 'Homeobox' domain profile. 96 151 IPR001356 GO:0003677(InterPro)
Hepe07g2356 394 MobiDBLite consensus disorder prediction 318 342 - -
Hepe07g2356 394 MobiDBLite consensus disorder prediction 152 178 - -
Hepe07g2356 394 MobiDBLite consensus disorder prediction 318 347 - -
Hepe07g2356 394 FunFam WUSCHEL-related homeobox 4 90 157 - -
Hepe07g2356 394 SMART HOX_1 88 155 IPR001356 GO:0003677(InterPro)
Hepe07g2356 394 MobiDBLite consensus disorder prediction 149 180 - -
Hepe07g2356 394 MobiDBLite consensus disorder prediction 35 50 - -
Hepe07g2356 394 Coils Coil 313 340 - -
Hepe07g2356 394 CDD homeodomain 92 152 IPR001356 GO:0003677(InterPro)
Hepe07g2356 394 Gene3D - 90 157 - -
Hepe07g2356 394 Pfam Homeodomain 91 150 IPR001356 GO:0003677(InterPro)
Hepe07g2356 394 MobiDBLite consensus disorder prediction 27 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1587 Hepe-Chr4:71344214 Hepe07g2356 Hepe-Chr7:67936044 2.64e-26 dispersed
Hepe07g2356 Hepe-Chr7:67936044 Hepe08g0838 Hepe-Chr8:7585166 8.79e-26 dispersed
Hepe02g3328 Hepe-Chr2:82873236 Hepe07g2356 Hepe-Chr7:67936044 3.22e-25 transposed
Hepe04g1889 Hepe-Chr4:73831937 Hepe07g2356 Hepe-Chr7:67936044 8.00e-15 transposed
Hepe08g1298 Hepe-Chr8:14555717 Hepe07g2356 Hepe-Chr7:67936044 2.65e-29 transposed
Hepe07g2356 Hepe-Chr7:67936044 Hepe09g0388 Hepe-Chr9:3470547 2.76e-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56042 PF00046 Homeodomain 1.60E-19 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2356 - - - 0.0