Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2360 ATGAAGAACCTCCTCAAGAAGTTTCACATCATGTCCGGTAATCAGTCTGATGATGCAGCAGAAGGGTCTACTTCATCGAGGGGGAGTAAATTGATTGAGGTTTCATCGCCTGATAAGCTGCCATCTCGCTCTCGGCCGACCCATTTTACTTCGGAGCATAAACCCTTTTCAGGGTTATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCTAGTCCTCCATCATCTTCAAATCACACTCCAGGGGAGATGATGGAGCCATTTGATTCAGTATCTAGCAGAGATGCTGCAATGGATACATCAAGGCATGATTCGGGGTCGAGTAATTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATTCAGCTTGCTTTGGAAATGAGTGCCAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATTAGTTTGGGGTCATGTGATCCTGATAATACTCCAGCTGAAGTTATTGCCTTTAGATATTGGAATTACAATTCTCTTAGCTATGACGACAAGATCATGGATGGCTTTTATGACCTATATGGAGTCTTCACCGGGTCCACTTCAGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATCAATAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACGGCATTGGAGATGGCCATCAAGATGGGGTCGGAATCTCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATCATATGGGGGGACCAGTGGGGAATCCTGAAAAGATGTTGAGAAAATGGAGAAGTCTTAGTTACGGCTTGAAAGCAACCCTTGGTAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCTCGTCATCGTGCATTGTTATTTAAGCTTTTGGCAGATGGCGTGGGTATCCCTTGTAGGTTGGTGAAAGGACCACAATACACAGGTTCTGATGATGTGGCTATGAACTTCGTAAAGTTTGATGACGGAAGGGAGTACATTGTGGATTTAATGGCAGCTCCTGGTACACTTATTCCAGCTGATATTGCTGGATCGCATGTAGAGTATGACAAATCCTCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCCTCTTCAAGCAGTGGGGTTGGCAGTTCATTAGAGGAAAATTCAGATTTTGGGATATCAGATAGGAAACCAAAGTCCCGGAATCTCAGTGCCACAAAGGAATATGATCCTCCGAATGTCGACAAGGGGCTATCACGCGATTTTTCTAGCAAACCAACTTATCCTGGCATGCACATTAGGTCACCTTCTTGGACTGAGGGTGTCAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAGGAGAATCCACGACTGGCTCAGAAGCTTCATGACGTGTTGCTTGAAAGTGGTGTAGTTGCTCCCCCTAACTTGTTTACCGAGGCATACCCTGACCAAATAGATGTTATTGTTGAGTCTAAGTCACCAACTGAAGACAAGGATCCTCGTCAAGCGAACTTTTTGCCTCCCTTGCCTCAGCCCAGACTGCATTCTAGAGCAAGCTCTACCCATGGCCAGCAACAGCACCTTAGACCTCTGGAACTCAACCTCTCTCTTGATTCAAGAGAAGCAGCTGGACAACCTATAGCCTTATCGTTTGAGGTAACTTCAGTGAAGTATGGGAGAAATGTACCGGTTGCCGCAGCAGCAGCAGCTGCTGCAGCTGTTGTTGCATCATCAATGGTGGTAGCTGCAGCAAAGAGCACTGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCCACCGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAGGCAGTATGAGCAGGTTGAGGCTGATGCTGCTCTTTATGAGCAGCGTGGAAGTGGAGATAGGGAGCATGGTGCTTATGGAGAAAATTCAGAGGGTGAACGAATATCAGATAAATCAGCAGGGAACGAAAGCACAAAATCAGATATTACCCTTGATGACGTTGCAGAATGCGAGATCCCATGGGAAGAAATTTCCTTAGGAGAGCGTATTGGACTTGGGTCATATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTTGACCAGGATATTTCTGGGGAATCTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGACTTCGGCATCCGAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGATTAATTCACCGCCCCAACAACCAATTAGATGAACGAAAGCGATTGAGGATGGCCCTTGATGCAGCCCGGGGAATGAATTATTTGCACAGTAGCACGCCTGTTATTGTACATCGTGATTTGAAGTCCCCAAATCTACTTGTTGATAAAAATTGGGTCGTGAAGGTATGCGATTTTGGTTTATCAAAAATGAAGAATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACCGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACCTTCAGATGAAAAGTGTGATGTTTATAGTTACGGAGTCATACTATGGGAGCTTTCTACAATGCAACAACCATGGGGAGGAATGAACCCGATGCAAGTTGTTGGCGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATTTGGATCCTGCCATTGCTGACATTATTAGGAAATGCTGGCAAACAGATCCAAGGTTAAGACCTTCATTTGCCGAGATCATGGCTACGCTAAAGCCGCTGCAGAAGCCAATGTCGAGTTCTCAAGTACCGAGACCAAATGCTTCTGCAGGTAGTGGTCGTGAGAAGGCTCGACTATTGCAAGTAACCGAAGACCCATCTGGCTAG 2988 45.88 MKNLLKKFHIMSGNQSDDAAEGSTSSRGSKLIEVSSPDKLPSRSRPTHFTSEHKPFSGLSGWLNSVTNRRSPSPPSSSNHTPGEMMEPFDSVSSRDAAMDTSRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKIMDGFYDLYGVFTGSTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKMGSESPISVNSYLVRKLAVLVSDHMGGPVGNPEKMLRKWRSLSYGLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVGIPCRLVKGPQYTGSDDVAMNFVKFDDGREYIVDLMAAPGTLIPADIAGSHVEYDKSSFSASPLSRDVDSSQAASSSSGVGSSLEENSDFGISDRKPKSRNLSATKEYDPPNVDKGLSRDFSSKPTYPGMHIRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDPRQANFLPPLPQPRLHSRASSTHGQQQHLRPLELNLSLDSREAAGQPIALSFEVTSVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSTDANLEIPVAAAATATAAAVVATTAAVNRQYEQVEADAALYEQRGSGDREHGAYGENSEGERISDKSAGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPNLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHSSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKMKNSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNLDPAIADIIRKCWQTDPRLRPSFAEIMATLKPLQKPMSSSQVPRPNASAGSGREKARLLQVTEDPSG 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67958237 67970448 - Hsped.07g23600.1 Hepe07g2360 575755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2360 995 MobiDBLite consensus disorder prediction 656 683 - -
Hepe07g2360 995 Gene3D Transferase(Phosphotransferase) domain 1 785 970 - -
Hepe07g2360 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 MobiDBLite consensus disorder prediction 378 460 - -
Hepe07g2360 995 PRINTS Tyrosine kinase catalytic domain signature 929 951 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 PRINTS Tyrosine kinase catalytic domain signature 866 876 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 PRINTS Tyrosine kinase catalytic domain signature 819 837 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 PRINTS Tyrosine kinase catalytic domain signature 780 793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 PRINTS Tyrosine kinase catalytic domain signature 885 907 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 MobiDBLite consensus disorder prediction 16 32 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 378 405 - -
Hepe07g2360 995 FunFam Serine/threonine-protein kinase CTR1 785 968 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 656 691 - -
Hepe07g2360 995 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 1 116 - -
Hepe07g2360 995 Gene3D Phosphorylase Kinase; domain 1 699 783 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 51 84 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 962 995 - -
Hepe07g2360 995 SUPERFAMILY Protein kinase-like (PK-like) 689 957 IPR011009 -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 97 116 - -
Hepe07g2360 995 Pfam Protein tyrosine and serine/threonine kinase 707 958 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 FunFam Serine/threonine-protein kinase isoform 1 697 784 - -
Hepe07g2360 995 ProSitePatterns Protein kinases ATP-binding region signature. 712 733 IPR017441 GO:0005524(InterPro)
Hepe07g2360 995 CDD STKc_MAP3K-like 712 958 - -
Hepe07g2360 995 ProSiteProfiles Protein kinase domain profile. 706 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 PANTHER SERINE-THREONINE PROTEIN KINASE 121 959 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe07g2360 995 SMART serkin_6 706 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2360 995 MobiDBLite consensus disorder prediction 521 555 - -
Hepe07g2360 995 Coils Coil 638 658 - -
Hepe07g2360 995 MobiDBLite consensus disorder prediction 406 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0044 Hepe-Chr3:512662 Hepe07g2360 Hepe-Chr7:67958237 9.11e-99 dispersed
Hepe04g1005 Hepe-Chr4:64668992 Hepe07g2360 Hepe-Chr7:67958237 5.08e-137 dispersed
Hepe07g2360 Hepe-Chr7:67958237 Hepe09g1569 Hepe-Chr9:42598454 2.74e-199 dispersed
Hepe08g2395 Hepe-Chr8:64430223 Hepe07g2360 Hepe-Chr7:67958237 7.98e-20 dispersed
Hepe09g1530 Hepe-Chr9:40128449 Hepe07g2360 Hepe-Chr7:67958237 1.84e-22 dispersed
Hepe01g1877 Hepe-Chr1:83658959 Hepe07g2360 Hepe-Chr7:67958237 1.12e-228 transposed
Hepe05g0144 Hepe-Chr5:1724092 Hepe07g2360 Hepe-Chr7:67958237 6.60e-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72994 PF07714 PK_Tyr_Ser-Thr 1.40E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2360 - - - 0.0