Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2378 ATGAAAATCTTCCTAAAACCCACCATTAGTACCTTCTTCTTCATCTCCTTCTTCATCGCGTTCCATGATCTTTCGCCATGTTTCAGCAAAGACGCCTTCGACTTATTTAAAGCTTGTGAGATCAGTTACAATTGCGGAGAATTGGTAAACATAAAGTATCCCTTCTCCGGGAATGAGGAGTGCGGGCGGAAAGAATTCAAACTCACCTGCAAACCCAATCGAACCACCACAATTCAAATCAACAAGATGGAATATAACGTTCTGAAAATCAACCAGTCAAACAATAGAATGAGGATCGCAAGATCAGACCTCTTCGATAATTACTGCCCAAGAAATGAAATCAAAGTGGCGACTCTGAATTCCCATCCGTTCGTGTATTCTTCCAACAATCGGAACATCTCGGTGTGGTACAATTGCTCGGCGGACAACAAGAATCAAATTCCGGAGATTTACCAATTTTGGTGCGATTGGGAAGCGGAGAGGCATGGCAGAGTGAATTATGCTTTCGAAGCGTCGGCGGCGGGTTGGAGTGAACAAATGGGGGACTGTGAAATGAAGATAGAAGTTAGGGTTACGATTGAGGGATTGAAAGAAGGGATGAAGAAGAGGAGGAGTCTGGTGGAGAAGGCAGTGAAATTAGGGTTTGAAGTTGAATATGGGAATTGGTATAAGGAAGCGTGTGAAGAATGCTATGAAAGTGGAGGCAAATGTGGAGGAAACCAGACGTATCCATATTACTGCATTTGTACAAATGGAGTTGCTAATCCTTACCTCTGTCAACTTCCTCCTCCTGCTCATGAACAACCAAATGATAAATGGAAGAAGGTCGTCATAGGTGTTGGCTCTGGCATTGGAGGCATAGTGATAATGAGTCTAATCCTTTTCATCAGGAGGCTTTGTTTGCACAAAAACAAGCATCCTCCTGCTTCCTCCTTTCTCCCAATGAAGGAACTTGAAAAACAAGAAAGTTATATGGTTGTACCTCTCTTCTCTTATCACGAACTTGCACAAGCTACAGACAAATTTAACTCAGCCAACGAGCTTGGAGATGGTGGCTTTGGCACTGTCTACTATGGCAAACTTCGGGATGGACGCGAGGTCGCAGTTAAACAATTGTTCGAAAATGACTACAGAAACCTTCAGCATTTCATGAATGAAGTTGAGATCCTTACTCGTTTGCGCCACCCACATCTAGTCACCCTTTATGGATGCACCTCTCGACGCTCCCGTAAACTCTTGTTGGTTTATGAATTCATTTCGAATGGTACTGTCGCCGATCATCTTCATGGCAACCGAGCAAAACCTGGTGAGCTTCCATGGCATACAAGGTTGAAGATTGCCATAGAGACTGCAAGTGCTCTGGCTTTTCTCCATGCTTCTGAGGCCATCCACCGTGATGTTAAAACCACCAACATTCTCCTCGACAACAACTTCGATGTTAAAGTTGCTGATTTTGGACTGTCTCGCCTTTTTCCTACGCAAGCTACCTATGTTTCGACTGCTCCACAAGGAACTCCTGGCTATGTTGATCCAGAGTATTACGAATGCTATCAACTAACAAATAAAAGCGACGTATTTAGCTTTGGAGTCGTGTTGGCTGAGCTGATATCTTCAAAGCCAGCAGTTGATATCACAAGGCACAGGCATGAGATTAACCTGTCGACAATGGCGATCAACAAGATACAAAACAACGAATTACACGACTTCGTAGATCCGTCCCTCGGATTTGAAACGGATCAAAGAATCAGAGACATGATCTACGCAGTTGCAGAGTTGGCATTTCAATGCCTGCAAAGTGTGAGGGATACAAGGCCGTCAATGTTGGAGACTCTAGAAATTCTAAAGAACATAGAGAGTTGTGGCAAAAGGAAAGGTGAAGAAATAGGCATTTCAGGAGAAGATGATAGGCTGCTGAAGGGTGGTTTAGTGCCACAATCCCCAGATTCTGTTACTGTTGTGCCTTGGATTAGCAAAGCTTCAACACCAAATGGCAGTGGGTGA 2001 43.93 MKIFLKPTISTFFFISFFIAFHDLSPCFSKDAFDLFKACEISYNCGELVNIKYPFSGNEECGRKEFKLTCKPNRTTTIQINKMEYNVLKINQSNNRMRIARSDLFDNYCPRNEIKVATLNSHPFVYSSNNRNISVWYNCSADNKNQIPEIYQFWCDWEAERHGRVNYAFEASAAGWSEQMGDCEMKIEVRVTIEGLKEGMKKRRSLVEKAVKLGFEVEYGNWYKEACEECYESGGKCGGNQTYPYYCICTNGVANPYLCQLPPPAHEQPNDKWKKVVIGVGSGIGGIVIMSLILFIRRLCLHKNKHPPASSFLPMKELEKQESYMVVPLFSYHELAQATDKFNSANELGDGGFGTVYYGKLRDGREVAVKQLFENDYRNLQHFMNEVEILTRLRHPHLVTLYGCTSRRSRKLLLVYEFISNGTVADHLHGNRAKPGELPWHTRLKIAIETASALAFLHASEAIHRDVKTTNILLDNNFDVKVADFGLSRLFPTQATYVSTAPQGTPGYVDPEYYECYQLTNKSDVFSFGVVLAELISSKPAVDITRHRHEINLSTMAINKIQNNELHDFVDPSLGFETDQRIRDMIYAVAELAFQCLQSVRDTRPSMLETLEILKNIESCGKRKGEEIGISGEDDRLLKGGLVPQSPDSVTVVPWISKASTPNGSG 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68145921 68150275 + Hsped.07g23780.1 Hepe07g2378 575773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2378 666 Pfam Protein tyrosine and serine/threonine kinase 345 612 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2378 666 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2378 666 Gene3D Transferase(Phosphotransferase) domain 1 419 627 - -
Hepe07g2378 666 SUPERFAMILY Protein kinase-like (PK-like) 321 614 IPR011009 -
Hepe07g2378 666 SMART serkin_6 342 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2378 666 Pfam Wall-associated receptor kinase C-terminal 166 251 IPR032872 -
Hepe07g2378 666 Pfam Wall-associated receptor kinase galacturonan-binding 44 101 IPR025287 GO:0030247(InterPro)
Hepe07g2378 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 34 658 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe07g2378 666 Gene3D Phosphorylase Kinase; domain 1 314 418 - -
Hepe07g2378 666 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524(InterPro)
Hepe07g2378 666 FunFam Wall-associated receptor kinase-like 20 419 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1782 Hepe-Chr7:60402058 Hepe07g2378 Hepe-Chr7:68145921 4.52e-71 dispersed
Hepe07g2378 Hepe-Chr7:68145921 Hepe09g0357 Hepe-Chr9:3149055 1.24e-164 dispersed
Hepe07g2377 Hepe-Chr7:68132119 Hepe07g2378 Hepe-Chr7:68145921 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72997 PF07714 PK_Tyr_Ser-Thr 3.20E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2378 - - - 0.0