Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2389 ATGCCAAATGGTCAACAAGTAGCAGTGAAGAAACTATCGGTAGATTCAAGACAAGGAGTGAGGCAATTTAGTAATGAAGTGAAACTTCTACTGAGACTTCAGCACAGAAATTTGGTCATTTTAGTGGGCTGTTGTGTAGAAGGGCCTGAAAAGATGCTTGTATATGAGTACCTGCCAAACAGAAGCCTCGATTACTTTCTTTTTGATAAAAGGAAGTCTCCATCCTTGGATTGGACAAGGCGGTTCCATATAATTACAGGTACTGTGAGAGGTCTTCTTTACTTGCATGAAGAGGCTCCTACAAGAATTATACATAGAGATATCAAAGCCAGTAACATATTACTAGATGAGCAATTGAATCCGAAAATCTCAGATTTTGGATTAGCTCGGCTTTTTCCCGGGGAGGACACACATTTGAATACATTCAAGATCGCTGGTACACATGGCTATATGGCTCCTGAATATGCAATTCATGGATATTTATCCGTGAAGAGTGATGTTTTCAGTTTTGGCGTCTTGGTGTTAGAGATTGTTAGTGGACGAAAAAATCATGACAATCGGCTCGATGTACAACGTGCCGACCTCTTGGGATATGCATGGTCACTTTACCAAGAAGGGAAGATTTTAGAATTAGTTGATAAAAGCCTAACAAAATGCAATGGAGATGAGGCAGCTATGTGCATTCAGTTGGGTTTGTTATGTTGTCAAGCGAGTGTTACAGATAGGCCTGATATGAATACCATTCATCTCATGCTTTCCAGTGATTCGTTCACGTTGCCGCGGCCCGGGAAACCTGGAATTCACGGTCGAGGAGCACGTTGGGCAACTTCCTATACTTCACCTTTCACCAATACAAATACTAGTACACAAACTGGCGTTACCAGAGCTTCTACTGGCAGCAGTTTGGTAGAGGATTATTCAAGAAATTCCATGTCTGTTTCCTCTATTGATGAAGGCAGATGA 963 41.54 MPNGQQVAVKKLSVDSRQGVRQFSNEVKLLLRLQHRNLVILVGCCVEGPEKMLVYEYLPNRSLDYFLFDKRKSPSLDWTRRFHIITGTVRGLLYLHEEAPTRIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHLNTFKIAGTHGYMAPEYAIHGYLSVKSDVFSFGVLVLEIVSGRKNHDNRLDVQRADLLGYAWSLYQEGKILELVDKSLTKCNGDEAAMCIQLGLLCCQASVTDRPDMNTIHLMLSSDSFTLPRPGKPGIHGRGARWATSYTSPFTNTNTSTQTGVTRASTGSSLVEDYSRNSMSVSSIDEGR 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68230461 68235560 + Hsped.07g23890.1 Hepe07g2389 575784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2389 320 SMART serkin_6 3 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2389 320 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Hepe07g2389 320 CDD STKc_IRAK 1 252 - -
Hepe07g2389 320 MobiDBLite consensus disorder prediction 278 301 - -
Hepe07g2389 320 Gene3D Transferase(Phosphotransferase) domain 1 58 258 - -
Hepe07g2389 320 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2389 320 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 266 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe07g2389 320 SUPERFAMILY Protein kinase-like (PK-like) 2 265 IPR011009 -
Hepe07g2389 320 FunFam Cysteine-rich receptor-like protein kinase 41 58 258 - -
Hepe07g2389 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2389 320 Pfam Protein tyrosine and serine/threonine kinase 4 250 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2389 Hepe-Chr7:68230461 Hepe08g0498 Hepe-Chr8:4359002 2.09e-89 dispersed
Hepe07g2389 Hepe-Chr7:68230461 Hepe07g1971 Hepe-Chr7:63673465 2.60e-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72999 PF07714 PK_Tyr_Ser-Thr 6.40E-40 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2389 - - - 0.0