Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2392 | ATGGCTGAGTTCACTGCAAACTTTCAGAGCTTAAAGTCATCATCTTTTCCTCTAATGGAAATGGATTCCAACCAAAATCCAAGTCTACTTCATAACCCAAATGGGATTTTTCTTGAAAACATTCCTGTTTTGTTCAATGACAGCAATTTCTTTGGCAATCAAGCTGCTCCTCCTCCAAGAATCTTGGAAAATTGGGGAGAAAATTTCACAGGAATTTTCTCTCTAGCCAATCAGATCATTACTGCACCTGTTTTTGATGAGCCTACAAATCCATCTGGAAATGACCTCCATGGAAGCAAAAAAAGAAAGCTTGAAATTGATGCTTCTGAAAGCAGCTCTGGCAACTCAACTCCTCAGATTTCTGAAACTGGGATCAACCCTAAAAATAACTCTGGAAAAGGAAAGCGGTCGAAAAAAGGCGAAAACGACGGCGAGAAACCGAGGGAAGTGGTTCATGTTAGAGCCAGAAGAGGTCAAGCAACAGATAGCCATAGTGTAGCAGAAAGGATAAGAAGAGAAAAAATCAATGAAAGATTGAGATGCTTGCAAGACATTGTTCCTGGATGCTATAAGACAATGGGAATGGCAGTGATGTTGGATGAGATAATCAATTATGTGCAGTCTTTGCAGAATCAAGTTGAGTTTCTTTCTATGAAACTCACAGCTGCAAGTTCCTATTATGACTTCAATTCAGACTCTTTAGATGCTGCTGACAAATTAAAGGCAAAGGAAATGAGGGAGGGAAATGGAGGATCAACTCAACTTGGTCCTTTTGATTTGTACTCAACATTGTCATTCAACAACATATGA | 810 | 39.38 | MAEFTANFQSLKSSSFPLMEMDSNQNPSLLHNPNGIFLENIPVLFNDSNFFGNQAAPPPRILENWGENFTGIFSLANQIITAPVFDEPTNPSGNDLHGSKKRKLEIDASESSSGNSTPQISETGINPKNNSGKGKRSKKGENDGEKPREVVHVRARRGQATDSHSVAERIRREKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSDSLDAADKLKAKEMREGNGGSTQLGPFDLYSTLSFNNI | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 68266336 | 68267737 | + | Hsped.07g23920.1 | Hepe07g2392 | 575787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2392 | 269 | Pfam | Helix-loop-helix DNA-binding domain | 163 | 210 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2392 | 269 | MobiDBLite | consensus disorder prediction | 109 | 131 | - | - | |
Hepe07g2392 | 269 | MobiDBLite | consensus disorder prediction | 134 | 166 | - | - | |
Hepe07g2392 | 269 | MobiDBLite | consensus disorder prediction | 86 | 166 | - | - | |
Hepe07g2392 | 269 | Gene3D | - | 156 | 227 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2392 | 269 | FunFam | transcription factor BEE 3-like | 156 | 227 | - | - | |
Hepe07g2392 | 269 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 157 | 227 | IPR036638 | GO:0046983(InterPro) | |
Hepe07g2392 | 269 | CDD | bHLH_AtBPE_like | 149 | 234 | - | - | |
Hepe07g2392 | 269 | SMART | finulus | 165 | 215 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2392 | 269 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 159 | 209 | IPR011598 | GO:0046983(InterPro) | |
Hepe07g2392 | 269 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 102 | 236 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g2392 | Hepe-Chr7:68266336 | Hepe10g1832 | Hepe-Chr10:55051312 | 5.29e-33 | dispersed | |
Hepe02g2699 | Hepe-Chr2:74908893 | Hepe07g2392 | Hepe-Chr7:68266336 | 1.75e-44 | wgd | |
Hepe07g2392 | Hepe-Chr7:68266336 | Hepe09g0348 | Hepe-Chr9:3058840 | 3.67e-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56044 | PF00010 | HLH | 1.50E-05 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2392 | - | - | - | 0.0 |