Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2420 ATGGCTTTTCTCCTCTGTTCTGCTTCCTACAAAGCTCTCCTCCCATTTGCTTTCTTCCTCCTCTTTCTGTCGTTTCAGTTCTTCTCTGCAATTAGCACTGATTTCATCGTCGGTGATGAAGATGGCTGGGCTGTCCCTAAGCCAAAAGAAGCTGATAGATATAACAAATGGGCCTCTCACAACAGATTCAATGTTGATGACACTGTCCATTTCAAGTACGAGAAAGATTCAGTGATGGTAGTAACAGAGGAAGAATACAAGCAATGCCTTTCTTCAAAGCCTGTGTTGTATAACAACAATGGCGACACTGAGGTGAAACTTGACAGAGCAGGATTGTTCTATTTCATCAGTGGAGTTTCAGGGCACTGTCAGAAAGGCCTAAAAATGATAATCAAAGTGTTGGAACCTGTCAGCCCTCCTCAGCCACCCACTGCTCCACCTACTGAGAAGAACACTGCAGTTAATTTAATCTCTGTTTCTTCCCAAATGTTGGGAATGTTCTTCATTTTCTTTCTTTCCTTTTTGTTCATTTGA 534 42.13 MAFLLCSASYKALLPFAFFLLFLSFQFFSAISTDFIVGDEDGWAVPKPKEADRYNKWASHNRFNVDDTVHFKYEKDSVMVVTEEEYKQCLSSKPVLYNNNGDTEVKLDRAGLFYFISGVSGHCQKGLKMIIKVLEPVSPPQPPTAPPTEKNTAVNLISVSSQMLGMFFIFFLSFLFI 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68580743 68582046 + Hsped.07g24200.1 Hepe07g2420 575815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2420 177 SUPERFAMILY Cupredoxins 32 134 IPR008972 -
Hepe07g2420 177 ProSiteProfiles Phytocyanin domain profile. 33 135 IPR003245 GO:0009055(InterPro)
Hepe07g2420 177 FunFam Early nodulin-like protein 1 32 138 - -
Hepe07g2420 177 CDD OsENODL1_like 33 134 IPR041846 -
Hepe07g2420 177 PANTHER BLUE COPPER PROTEIN 24 140 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Hepe07g2420 177 Gene3D - 31 138 IPR008972 -
Hepe07g2420 177 Pfam Plastocyanin-like domain 50 126 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3056 Hepe-Chr2:79713291 Hepe07g2420 Hepe-Chr7:68580743 3.48e-37 dispersed
Hepe03g1627 Hepe-Chr3:73163921 Hepe07g2420 Hepe-Chr7:68580743 8.44e-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2420 - - - 0.0