Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2442 ATGGCGAAAAAATCCGAGAAATTTTCAGCAGATTTTATGATGGGTGGGGTTGCTGCGATTGCAGCAAAAAGTGCAGCGGCGCCGATCGAGAGGGTCAAGCTTTTGTTGCAGAATCAAGGAGAGATGATGAAGAGAGGCCATCTTAAGAAGCCATATCTGGGCATTCATGACTGTTTCGGAAGAGTTTTCAGAGAAGAAGGTCTCTTGTCTCTTTGGAGGGGAAATCAGGCTAATGTTATTCGATATTTCCCTACTCAGGCTTTCAACTTCGCGTTCAAAGGTTACTTTAAAACCAAATTTGGGCGCTCAAAAGAGAAGGATGGATACATCAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCAACTACGTCGTTGTTTCTGTATCATTTGGATTATGCACGCACTCGACTAGGCACGGATGCGAAGGACGGTAACAGTCAGCGCCAGTTTAAAGGGCTACTGGATGTCTACAGGAAAACCTTGTCAAGTGATGGAATTGTCGGTCTATACCGAGGATTTAGTGTTTCAATTGTGGGAATTACTCTGTACCGGGGAATGTATTTTGGGATTTACGACACTTTAAAGCCTCTTGTTTTGGTTGGGAACTTTGAGGGAAACTTTTTTGCTAGTTTCTTATTGGGGTGGAGTATCACAACCTTTTCTGGGGTATGTGCTTATCCTTTCGACACTTTGCGACGGAGAATGATGCTTACCTCTGGACAAACCTTGAAGTATCGTAGCGGTTTGCATGCATTTTCAGAGATCATTCGTCACGAAGGTATTACTGCTATTTTTCGAGGAGTCACTGCCAATATGCTTGCTGGTGTTGCTGGGGCTGGGGTTCTTGCAGGTTATGATCGACTGCACGAAATTGCTTGTAGACATGGTTACTCCTTTGGAGGGCAACAACAACATCAAATAGCCTCAAAATGA 945 44.34 MAKKSEKFSADFMMGGVAAIAAKSAAAPIERVKLLLQNQGEMMKRGHLKKPYLGIHDCFGRVFREEGLLSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDAKDGNSQRQFKGLLDVYRKTLSSDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGNFEGNFFASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGQTLKYRSGLHAFSEIIRHEGITAIFRGVTANMLAGVAGAGVLAGYDRLHEIACRHGYSFGGQQQHQIASK 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68767739 68770220 + Hsped.07g24420.1 Hepe07g2442 575837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2442 314 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 4 303 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 Pfam Mitochondrial carrier protein 113 202 IPR018108 -
Hepe07g2442 314 Pfam Mitochondrial carrier protein 210 295 IPR018108 -
Hepe07g2442 314 Pfam Mitochondrial carrier protein 6 102 IPR018108 -
Hepe07g2442 314 Gene3D Mitochondrial carrier domain 1 301 IPR023395 -
Hepe07g2442 314 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 PRINTS Adenine nucleotide translocator signature 214 230 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe07g2442 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 201 IPR018108 -
Hepe07g2442 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 295 IPR018108 -
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085(InterPro)
Hepe07g2442 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
Hepe07g2442 314 SUPERFAMILY Mitochondrial carrier 6 291 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1378 Hepe-Chr4:69455331 Hepe07g2442 Hepe-Chr7:68767739 5.83e-132 dispersed
Hepe07g2442 Hepe-Chr7:68767739 Hepe03g1870 Hepe-Chr3:75697492 1.23e-06 dispersed
Hepe07g2442 Hepe-Chr7:68767739 Hepe08g1397 Hepe-Chr8:16479083 4.71e-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2442 K05863 - csv:101207715 540.036