Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2448 ATGATTTCTCTGGCAGCGGCATATGACTCGCTGGATCCGAATGGAAACATTGAAATCAAATGGGATGTCATGTACTGGACTGGCGATGGTTATGGGGCAATGGTGTCGATAACGAACCACCAAATGTATCGACATATCACGAGCCCCGGATGGACCTTGGGATGGGTATGGGCAAAGAATGAGATCATCTGGTCCATGCAGGGAGCTCAAGCTACTGATCAAGGAGATTGTTCTACATCTAGAGAAACCATCCCACACAGCTGCAAAAGAGATCCAACAGTAGTTGACTTGCTTCCAGGTGTTCCTTATAACAAACAGGTAGCTGGGTGCTGCAAAGGTGGTGTTTTGACATCTTGGGGACAAGATCCTTCATCTGCTGTCTCTGCCTTCCAATTGACTGTTGGTCACTCTGGTACTTCAAATAAAACAGTGAGACTTCCCAAGAATTTCACCTTGTATGGTCCAGGGCTAGGTTACACATGTGGCCAAGCAAAGATTGCTCCGGCATCGACTTTCTACTCGCCTGATGGTCGTCGAAAAACTAATGCATTGATGACTTGGAATGTGATATGCACTTACTCACAGTTTCTTGCTTCTGAAACTCCAACCTGTTGTGTCTCCATGTCATCTTTCTACAACCCAACAATCACTCCTTGTAAAACATGTGCTTGTGGCTGCCAAGGCAGAACAGCATGTATCCTGGCCGAGTCGGATCTTCAAAGCGTTACGGCATTGAATGCATCTACAAATGACAATGCTCCATTGCTGCAGTGCACGGGACATAACTGTCCTATTCAAGTTCACTGGCATGTTAAGGAAAACTACAAGGGATATTGGCGAGTCAAGATAACAATCAGCAATCTCAACTATCAACTTAACTACTCACAATGGACTCTTGTCGTCGAGCATCCCAATTTCAACAACACATTGGAAGTTTATAGCTTTGTCTATAAGCCACTCACCCCCTTCATCTCTAAGAATGACACAGCTCTATTCCATGGCTTAAAATCTATCAACGATGTGCTACTTCAAGCAGGGCCAAATGGAAACGTTAACTCAGAGATGATTCTTCAGAAGGATTCACCATTTACATTTGAACACGGCTGGGCGTTCCCTCGAAAAGTTTACTTCGATGGAGATGAATGTGTGATGCCCCTTCCTGATTCTTACCCCTTCCTACCCAACTTAGCTAATGGAAATCCAATTCTATTGTCAACACTTGCTTGCATTTTGCTTCCCATATTCCTTACATTGTTATCTTAG 1263 44.26 MISLAAAYDSLDPNGNIEIKWDVMYWTGDGYGAMVSITNHQMYRHITSPGWTLGWVWAKNEIIWSMQGAQATDQGDCSTSRETIPHSCKRDPTVVDLLPGVPYNKQVAGCCKGGVLTSWGQDPSSAVSAFQLTVGHSGTSNKTVRLPKNFTLYGPGLGYTCGQAKIAPASTFYSPDGRRKTNALMTWNVICTYSQFLASETPTCCVSMSSFYNPTITPCKTCACGCQGRTACILAESDLQSVTALNASTNDNAPLLQCTGHNCPIQVHWHVKENYKGYWRVKITISNLNYQLNYSQWTLVVEHPNFNNTLEVYSFVYKPLTPFISKNDTALFHGLKSINDVLLQAGPNGNVNSEMILQKDSPFTFEHGWAFPRKVYFDGDECVMPLPDSYPFLPNLANGNPILLSTLACILLPIFLTLLS 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68827158 68829096 + Hsped.07g24480.1 Hepe07g2448 575843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2448 420 PANTHER PROTEIN COBRA 3 411 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Hepe07g2448 420 Pfam COBRA-like protein 31 194 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe07g2448 420 PIRSF COBRA 1 420 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2448 Hepe-Chr7:68827158 Hepe09g0286 Hepe-Chr9:2451841 3.82e-206 dispersed
Hepe05g1403 Hepe-Chr5:62902835 Hepe07g2448 Hepe-Chr7:68827158 1.03e-39 transposed
Hepe07g1196 Hepe-Chr7:28357473 Hepe07g2448 Hepe-Chr7:68827158 4.74e-30 transposed
Hepe02g0921 Hepe-Chr2:11095838 Hepe07g2448 Hepe-Chr7:68827158 1.10e-215 wgd
Hepe07g2448 Hepe-Chr7:68827158 Hepe09g0285 Hepe-Chr9:2448414 2.21e-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2448 - - - 0.0