Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2488 ATGGGGTGTGTGAACACGAAGCACGCGGTGTCCGTTACGCCTGCATTCGATCACTCCTGTGTGTTTCGGGACAATGAATCGACGGCGATGGGGAACTCCGGTCGGAGTCGAATCGGGTTGGGGGAGATTGAGAAGGGTTCGAAGCCGAAGCCGAAAACGAAGACCAAAGGGTCCAGTGAGTTCAATGGGGTTGGGACTGAGTTGGGTGAGTCAGCTCGGGCGAGTTCTAATGGCGCTGGGAACGAGACTTTGAGCTTCAGATTGGGGAATTTGAATAAGTATATGGAAGGTGAACAAGTGGCGGCGGGGTGGCCGGCTTGGCTCAGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGGTCCGATGCCTATGAGAAGTTGGAAAAGATTGGACAAGGTACGTATAGCAGTGTATTCCGAGCACGTGAACTTGAAACGGGGAGGATAGTCGCTTTAAAGAAGGTCCGGTTCGACAATTTTGAGCCTGAAAGTGTTAGATTTATGGCGCGAGAGATAATGATTCTCCGCAGGCTTGATCACCCTAACATCATCAAATTGGAGGGCTTAATTACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGACCATGACATTACTGGACTCTTGTCCTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGATATCCGGGCTTGAGCATTGTCACTCACGTGGTGTAATGCATCGGGATATTAAAGGATCTAATCTTCTAGTCAATAATGAAGGAGTATTGAAGGTGGCTGATTTTGGATTGGCAAACTTCTGTAATTCCGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACTCTATGGTATCGTCCACCTGAACTTCTACTGGGTTCGACAGACTATAAAGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTCGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAACTTCCTCATGCCACTTTGTTCAAGCCACAACATCCTTATAATAATTGTTTACGGCAGACCTTTAAAGATCATCCTTCGACGACTGTGAACTTGTTAGAAACTCTTCTTTCCGTTGAACCATACAAGCGTGGAGTTGCCTCCTCCGCTCTCACCTCTGAGTATTTCAGTACGAAACCTTATGCATGCGATCCATCAAGCATGCCAATATATCCACCTAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCGAGAAGGAAAAAAGGTAGTGGAAGAGCCCGTGGACTAGATAACAGAAGGTTAACGAGAAAGCATCTTGGAATCAGTAAATTGGCACCAGCAGAGGACTTGTCCGTCTCGGCTCGAGATTTGCATAAAATTAGTATTAATGCACAGAATCTTAAAGAGGAAAAGGTTATCAAAGGCGATGAGGTGCAAAAGCTGTCAATTGATAAATTGGAAGAGACTATACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGATGCTGCTATTAGATCTCATTCGAGATCAACTTCACGAGGACACCTAATTAATGGGCTGGAACATTCTGCTACATTTCATTCAAGAAGCAATTTGGACTCCAAGTCTCATGAAAAGGGAGACCTATCGTCCATCAGCCGCTCAAGTTCCAAGGGTCATGAATCAAATGAGAGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGATCGTCCCGATTCATTTGATACTTCGGATGAGTACCACTCACAGGAATTTTCAGTGGCACTTTATTTGCGAGATGAAATGGAAGCTAAGAGGAGTGATCTGAGTTATCAAGACCATGTGGACAAAGTTGAATATTCCGGGCCCTTGTTATCTCAATCTAGCAGAGTGGATGAACTGCTAGACAGACACGAGAGGCACATCCGACAGACCGTTCGAAGATCATGGTTCCAAAGAGATGCCTTCTTCAGCTACATTTCTGGTTCTGTCCTCTTCTGCAATGTTGTTAACGAACCGTACAAATAG 2148 45.76 MGCVNTKHAVSVTPAFDHSCVFRDNESTAMGNSGRSRIGLGEIEKGSKPKPKTKTKGSSEFNGVGTELGESARASSNGAGNETLSFRLGNLNKYMEGEQVAAGWPAWLSAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLISGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYKASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDHPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPYACDPSSMPIYPPSKEIDAKQREESRRKKGSGRARGLDNRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGDEVQKLSIDKLEETIHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDDAAIRSHSRSTSRGHLINGLEHSATFHSRSNLDSKSHEKGDLSSISRSSSKGHESNERSKVVIRNQWGKFDRPDSFDTSDEYHSQEFSVALYLRDEMEAKRSDLSYQDHVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRDAFFSYISGSVLFCNVVNEPYK 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69223567 69228874 + Hsped.07g24880.1 Hepe07g2488 575883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2488 715 MobiDBLite consensus disorder prediction 431 456 - -
Hepe07g2488 715 ProSiteProfiles Protein kinase domain profile. 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2488 715 MobiDBLite consensus disorder prediction 41 55 - -
Hepe07g2488 715 SUPERFAMILY Protein kinase-like (PK-like) 121 417 IPR011009 -
Hepe07g2488 715 Pfam Protein kinase domain 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2488 715 MobiDBLite consensus disorder prediction 56 78 - -
Hepe07g2488 715 Gene3D Transferase(Phosphotransferase) domain 1 210 450 - -
Hepe07g2488 715 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Hepe07g2488 715 SMART serkin_6 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2488 715 CDD STKc_CDK9_like 127 411 - -
Hepe07g2488 715 FunFam probable serine/threonine-protein kinase At1g54610 210 450 - -
Hepe07g2488 715 MobiDBLite consensus disorder prediction 26 78 - -
Hepe07g2488 715 MobiDBLite consensus disorder prediction 422 456 - -
Hepe07g2488 715 MobiDBLite consensus disorder prediction 572 604 - -
Hepe07g2488 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g2488 715 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524(InterPro)
Hepe07g2488 715 FunFam probable serine/threonine-protein kinase At1g54610 114 209 - -
Hepe07g2488 715 PANTHER CELL DIVISION PROTEIN KINASE 127 411 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1598 Hepe-Chr7:55767256 Hepe07g2488 Hepe-Chr7:69223567 2.36e-193 dispersed
Hepe07g2488 Hepe-Chr7:69223567 Hepe08g2381 Hepe-Chr8:64277137 9.27e-182 dispersed
Hepe10g0613 Hepe-Chr10:7570656 Hepe07g2488 Hepe-Chr7:69223567 7.94e-45 wgd
Hepe02g3190 Hepe-Chr2:81452503 Hepe07g2488 Hepe-Chr7:69223567 3.62e-207 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73001 PF00069 Pkinase 1.90E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2488 - - - 0.0