Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2488 | ATGGGGTGTGTGAACACGAAGCACGCGGTGTCCGTTACGCCTGCATTCGATCACTCCTGTGTGTTTCGGGACAATGAATCGACGGCGATGGGGAACTCCGGTCGGAGTCGAATCGGGTTGGGGGAGATTGAGAAGGGTTCGAAGCCGAAGCCGAAAACGAAGACCAAAGGGTCCAGTGAGTTCAATGGGGTTGGGACTGAGTTGGGTGAGTCAGCTCGGGCGAGTTCTAATGGCGCTGGGAACGAGACTTTGAGCTTCAGATTGGGGAATTTGAATAAGTATATGGAAGGTGAACAAGTGGCGGCGGGGTGGCCGGCTTGGCTCAGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGGTCCGATGCCTATGAGAAGTTGGAAAAGATTGGACAAGGTACGTATAGCAGTGTATTCCGAGCACGTGAACTTGAAACGGGGAGGATAGTCGCTTTAAAGAAGGTCCGGTTCGACAATTTTGAGCCTGAAAGTGTTAGATTTATGGCGCGAGAGATAATGATTCTCCGCAGGCTTGATCACCCTAACATCATCAAATTGGAGGGCTTAATTACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGACCATGACATTACTGGACTCTTGTCCTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGATATCCGGGCTTGAGCATTGTCACTCACGTGGTGTAATGCATCGGGATATTAAAGGATCTAATCTTCTAGTCAATAATGAAGGAGTATTGAAGGTGGCTGATTTTGGATTGGCAAACTTCTGTAATTCCGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACTCTATGGTATCGTCCACCTGAACTTCTACTGGGTTCGACAGACTATAAAGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTCGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAACTTCCTCATGCCACTTTGTTCAAGCCACAACATCCTTATAATAATTGTTTACGGCAGACCTTTAAAGATCATCCTTCGACGACTGTGAACTTGTTAGAAACTCTTCTTTCCGTTGAACCATACAAGCGTGGAGTTGCCTCCTCCGCTCTCACCTCTGAGTATTTCAGTACGAAACCTTATGCATGCGATCCATCAAGCATGCCAATATATCCACCTAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCGAGAAGGAAAAAAGGTAGTGGAAGAGCCCGTGGACTAGATAACAGAAGGTTAACGAGAAAGCATCTTGGAATCAGTAAATTGGCACCAGCAGAGGACTTGTCCGTCTCGGCTCGAGATTTGCATAAAATTAGTATTAATGCACAGAATCTTAAAGAGGAAAAGGTTATCAAAGGCGATGAGGTGCAAAAGCTGTCAATTGATAAATTGGAAGAGACTATACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGATGCTGCTATTAGATCTCATTCGAGATCAACTTCACGAGGACACCTAATTAATGGGCTGGAACATTCTGCTACATTTCATTCAAGAAGCAATTTGGACTCCAAGTCTCATGAAAAGGGAGACCTATCGTCCATCAGCCGCTCAAGTTCCAAGGGTCATGAATCAAATGAGAGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGATCGTCCCGATTCATTTGATACTTCGGATGAGTACCACTCACAGGAATTTTCAGTGGCACTTTATTTGCGAGATGAAATGGAAGCTAAGAGGAGTGATCTGAGTTATCAAGACCATGTGGACAAAGTTGAATATTCCGGGCCCTTGTTATCTCAATCTAGCAGAGTGGATGAACTGCTAGACAGACACGAGAGGCACATCCGACAGACCGTTCGAAGATCATGGTTCCAAAGAGATGCCTTCTTCAGCTACATTTCTGGTTCTGTCCTCTTCTGCAATGTTGTTAACGAACCGTACAAATAG | 2148 | 45.76 | MGCVNTKHAVSVTPAFDHSCVFRDNESTAMGNSGRSRIGLGEIEKGSKPKPKTKTKGSSEFNGVGTELGESARASSNGAGNETLSFRLGNLNKYMEGEQVAAGWPAWLSAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLISGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYKASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDHPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPYACDPSSMPIYPPSKEIDAKQREESRRKKGSGRARGLDNRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGDEVQKLSIDKLEETIHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDDAAIRSHSRSTSRGHLINGLEHSATFHSRSNLDSKSHEKGDLSSISRSSSKGHESNERSKVVIRNQWGKFDRPDSFDTSDEYHSQEFSVALYLRDEMEAKRSDLSYQDHVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRDAFFSYISGSVLFCNVVNEPYK | 715 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 69223567 | 69228874 | + | Hsped.07g24880.1 | Hepe07g2488 | 575883 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 431 | 456 | - | - | |
Hepe07g2488 | 715 | ProSiteProfiles | Protein kinase domain profile. | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Hepe07g2488 | 715 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 417 | IPR011009 | - | |
Hepe07g2488 | 715 | Pfam | Protein kinase domain | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 56 | 78 | - | - | |
Hepe07g2488 | 715 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 450 | - | - | |
Hepe07g2488 | 715 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 209 | - | - | |
Hepe07g2488 | 715 | SMART | serkin_6 | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g2488 | 715 | CDD | STKc_CDK9_like | 127 | 411 | - | - | |
Hepe07g2488 | 715 | FunFam | probable serine/threonine-protein kinase At1g54610 | 210 | 450 | - | - | |
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 26 | 78 | - | - | |
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 422 | 456 | - | - | |
Hepe07g2488 | 715 | MobiDBLite | consensus disorder prediction | 572 | 604 | - | - | |
Hepe07g2488 | 715 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g2488 | 715 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 156 | IPR017441 | GO:0005524(InterPro) | |
Hepe07g2488 | 715 | FunFam | probable serine/threonine-protein kinase At1g54610 | 114 | 209 | - | - | |
Hepe07g2488 | 715 | PANTHER | CELL DIVISION PROTEIN KINASE | 127 | 411 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g1598 | Hepe-Chr7:55767256 | Hepe07g2488 | Hepe-Chr7:69223567 | 2.36e-193 | dispersed | |
Hepe07g2488 | Hepe-Chr7:69223567 | Hepe08g2381 | Hepe-Chr8:64277137 | 9.27e-182 | dispersed | |
Hepe10g0613 | Hepe-Chr10:7570656 | Hepe07g2488 | Hepe-Chr7:69223567 | 7.94e-45 | wgd | |
Hepe02g3190 | Hepe-Chr2:81452503 | Hepe07g2488 | Hepe-Chr7:69223567 | 3.62e-207 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73001 | PF00069 | Pkinase | 1.90E-68 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2488 | - | - | - | 0.0 |