Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2494 ATGCTGCAACATACTAGGGTAATCAGGTTTTGCTTAGGCTTTGGTTTATCCGGTATGGATTGCAAGGAACTCAATTTGAACGAAGATTGTGTTGGCTGTGCTAGTGGGGTGAAGAATGGGGGAGATGCGTTTATAGACAGGAGCAAAGTCAGGATTTTGCTGTGTGATAATGATTCTAAAAGTTCAGAAGAGGTTTTCAAGCTTCTTTTGAAATGTTCCTACCAAGTCATTTCGGTGAGTTCAGCTAGACAGGTCATTGATGCTTTGAATGCGGAGGGACCTGATATTGATATTATACTCTCTGAAGTTGACCTCCCAATGGCCAAAGGTATGAAAATGTTGAAGTACATCACCCGGGATAAAGAGCTGCGACGCATTCCTGTTATCAGTAAGTTCTGGTTTCTTTACTGGCAAGTCATCAGACGTTAA 429 41.96 MLQHTRVIRFCLGFGLSGMDCKELNLNEDCVGCASGVKNGGDAFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPDIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVISKFWFLYWQVIRR 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69301279 69304744 - Hsped.07g24940.1 Hepe07g2494 575889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2494 142 PANTHER TWO-COMPONENT RESPONSE REGULATOR 48 129 IPR045279 GO:0009736(InterPro)
Hepe07g2494 142 SUPERFAMILY CheY-like 46 129 IPR011006 -
Hepe07g2494 142 Gene3D - 42 132 - -
Hepe07g2494 142 ProSiteProfiles Response regulatory domain profile. 51 142 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2494 Hepe-Chr7:69301279 Hepe09g0102 Hepe-Chr9:826206 5.13e-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56058 None None None None Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2494 K12127 - csv:101220107 211.075