Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2513 ATGAAACCTAATCAATTTCACCATAAACCCTTCACGAAAGAGGAAGAACAAAAAAACAGCAAGAAAACAAGAGTGAGACTCGAGAACGAGGAGCGAAAACGGGAAACGAAGAGCAATAATGAGTTTCAATACATGTTCATAAAGAAGGGTAAAACGAGTCCACCCAAAGGAAACAAAGCCACAACCAAAGATCAAAACCAAGAAAAGAAATTGAGTGAGAGATCAATGGCAGAAGAAAACAGAGTAATATTACATGGAATGTGGGCAAGCCCTTATGTGAAAGGAGTAGAACTTGCCCTCCGAGTTAAGGGCATACCCTTCGAGTATGTAGAAGAAGATTTGAAGAACAAAAGTCCTCTTCTTGTAAAGTACAACCCCATTTACAAGAAGGTCCCTGTACTCGTCCATAATGGAAAACCCATCTCGGAATCACTCATCATCATTCAATACATCGACGAAATCTGGAACGACAATGGCCGCCCATCTCTTCTTCCAAATGATCCCTACAAACGAGCTCAAATTCGCTTCTGGGTCGCCTTCCTCCACCAACAGCTGTTTGATGCGTTTCTCACCGTGTTCAAGACGACTGGAGAAGTGCAGCAAAAAGGCGTTGAAGAAGTGAGTGAAAGGCTAAGGCAAGTTGAAGATGGGCTGCAAAATGGGCTGATTTCAGAGGGGCCGTTCGTGAATGGTGACGAATTGGGGGTTTTGGACATTGTGATGTGTTCGTTGTTTGGGGCGTACAAGCTGCAACAAGAAGTGCTTGGAATTACGTTTATTGATTCGGAGAGGTTTCCATTGATTTTGGGTTGGTTGAATGCGATGGCTGAGCATCCGGCGGCGAAAGAGGCAACTCCACCGCCGGAGAAGATTTTGGGTTTGCTTCGGTTTCTGCGGCAGAACGCACTGCAATCGGCTGCTGCTTCGTGA 930 45.16 MKPNQFHHKPFTKEEEQKNSKKTRVRLENEERKRETKSNNEFQYMFIKKGKTSPPKGNKATTKDQNQEKKLSERSMAEENRVILHGMWASPYVKGVELALRVKGIPFEYVEEDLKNKSPLLVKYNPIYKKVPVLVHNGKPISESLIIIQYIDEIWNDNGRPSLLPNDPYKRAQIRFWVAFLHQQLFDAFLTVFKTTGEVQQKGVEEVSERLRQVEDGLQNGLISEGPFVNGDELGVLDIVMCSLFGAYKLQQEVLGITFIDSERFPLILGWLNAMAEHPAAKEATPPPEKILGLLRFLRQNALQSAAAS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69459364 69460911 - Hsped.07g25130.1 Hepe07g2513 575908

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2513 309 Gene3D Glutaredoxin 76 163 - -
Hepe07g2513 309 SFLD Main (cytGST) 79 305 - -
Hepe07g2513 309 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 167 294 IPR010987 -
Hepe07g2513 309 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 80 159 IPR004045 -
Hepe07g2513 309 MobiDBLite consensus disorder prediction 1 75 - -
Hepe07g2513 309 SUPERFAMILY GST C-terminal domain-like 153 300 IPR036282 -
Hepe07g2513 309 Pfam Glutathione S-transferase, N-terminal domain 82 153 IPR004045 -
Hepe07g2513 309 CDD GST_N_Tau 82 155 - -
Hepe07g2513 309 MobiDBLite consensus disorder prediction 7 39 - -
Hepe07g2513 309 FunFam Glutathione S-transferase U9 164 305 - -
Hepe07g2513 309 SUPERFAMILY Thioredoxin-like 81 185 IPR036249 -
Hepe07g2513 309 CDD GST_C_Tau 168 298 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe07g2513 309 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 82 295 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe07g2513 309 Gene3D - 164 306 - -
Hepe07g2513 309 Coils Coil 13 33 - -
Hepe07g2513 309 SFLD Main.3: Omega- and Tau-like 79 305 IPR045073 -
Hepe07g2513 309 FunFam Tau class glutathione S-transferase 76 162 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2513 K00799 - - csv:101217019 294.278
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2513 Hepe-Chr7:69459364 Hepe09g0371 Hepe-Chr9:3298201 4.84e-43 dispersed
Hepe07g2513 Hepe-Chr7:69459364 Hepe07g1403 Hepe-Chr7:46400513 2.72e-32 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g547 . . . . . . . . Cmo13g01183 . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00544 Chy12g01545 . . . . Bda14g00849 . . Bma03g00824 . Sed08g2065 . . Cma13g01129 . . . . . Bhi08g01175 Tan05g2447 Cmetu10g1222 Lac10g0073 Hepe07g2513 . . Cla04g01202 Cam04g1264 Cec01g1774 Cco01g1822 Clacu04g1293 Cmu04g1269 Cre01g1562 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001282 1 2 2 3 1 3 0 4 4 3 1 4 2 5 2 1 4 1 1 2 3 3 1 6 4 1 2 3 2 4 75