Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2519 ATGAGAAAAGCACTTTCGGGATCAAAGGAGTTTTTTGAATACCCTTTGGATTGTAAGCTTGCGGCCAGCCCTCAGCCCACCGCTCCTCTGCCGGCCGGCTATGGCCGCCCGCCGGATAATTCTCCTGATAAGAATGAATTCTTTATGATGGCACCACCTGATTCAACATTCAATGTCTTCCCTTCCAACCCTAAAGGCTTTAGCGAAGTTATGAAGGAGTTATTCTCATGCTTTGTGAAGACAGAGAAGAAGGAATATGATTCCCATTCTCATTCTCATTCTCATTCTCAACCCGATCTTGATCTTGTTGATACCTCCAAGAAGCCCTCTCCTAAGAGGACTTCCACCAAGGACCGCCACACCAAAGTCGACGGGCGTGGTCGTCGCACTCGAATGCCTGCTCTTTGTGCTGCTCGAGTTTTCCAACTCACCCGCGAGCTCGGCCACAAGTCCGACGGTGAAACCATCGAGTGGCTTCTTCAGCAAGCCGAACCTGCCGTCATCGCTGCCACCGGTACCGGTACCATACCTGCAAACTTCAACTCTCTCAATACATCGTTAAGAAGATCGACCACAAGCATTTCTTTACCGTCCCAACTAAGATCCTCGTCTTACTACCATCCCGGAGTGATGGCGTTCAACTCTCAACCAATCAACATGAATCCAATGACGCAAGCAAAAGAAGATCACTTCCCTGATCCGCAGCGCCAAATGGGGAGCTATCTGCTGCAACCGAGCACAGGGGCAATCCCGGCGAATATTCCGGCGAACTTCTGGATGTTTTCCGACGGGAACCTCGGCGGCGGAGGAGGCGAGTCTTTATGGAGGCTTCCGTCGGCCACCCAAGACGGCGCTTTATACAGAGGACAAAACTCCGGTGGTGGATTACGTTTCTCCAACCTGGCAGCTCCGTTGACGCTCCTCCCGGGGAAGCCATTGGGACCCACCGTGAATAATGATGGACAGTTGAATATCTACGCCGGGCAAAATCCGCCGCATGGGGCGGCGCCGGACACCGGGATATCGTAA 1029 52.48 MRKALSGSKEFFEYPLDCKLAASPQPTAPLPAGYGRPPDNSPDKNEFFMMAPPDSTFNVFPSNPKGFSEVMKELFSCFVKTEKKEYDSHSHSHSHSQPDLDLVDTSKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSTTSISLPSQLRSSSYYHPGVMAFNSQPINMNPMTQAKEDHFPDPQRQMGSYLLQPSTGAIPANIPANFWMFSDGNLGGGGGESLWRLPSATQDGALYRGQNSGGGLRFSNLAAPLTLLPGKPLGPTVNNDGQLNIYAGQNPPHGAAPDTGIS 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69524841 69530178 + Hsped.07g25190.1 Hepe07g2519 575914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2519 342 ProSiteProfiles TCP domain profile. 116 170 IPR017887 -
Hepe07g2519 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 95 221 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Hepe07g2519 342 MobiDBLite consensus disorder prediction 88 128 - -
Hepe07g2519 342 Gene3D - 1 85 IPR027443 -
Hepe07g2519 342 Pfam TCP family transcription factor 114 212 IPR017887 -
Hepe07g2519 342 MobiDBLite consensus disorder prediction 22 50 - -
Hepe07g2519 342 SUPERFAMILY Clavaminate synthase-like 2 82 - -
Hepe07g2519 342 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0200 Hepe-Chr7:1767012 Hepe07g2519 Hepe-Chr7:69524841 5.32e-29 dispersed
Hepe07g2519 Hepe-Chr7:69524841 Hepe10g1486 Hepe-Chr10:51695896 1.59e-38 dispersed
Hepe10g1732 Hepe-Chr10:54154477 Hepe07g2519 Hepe-Chr7:69524841 3.12e-55 wgd
Hepe07g2519 Hepe-Chr7:69524841 Hepe09g0125 Hepe-Chr9:998999 3.40e-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56064 PF03634 TCP 1.40E-35 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2519 - - - 0.0