Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g2519 | ATGAGAAAAGCACTTTCGGGATCAAAGGAGTTTTTTGAATACCCTTTGGATTGTAAGCTTGCGGCCAGCCCTCAGCCCACCGCTCCTCTGCCGGCCGGCTATGGCCGCCCGCCGGATAATTCTCCTGATAAGAATGAATTCTTTATGATGGCACCACCTGATTCAACATTCAATGTCTTCCCTTCCAACCCTAAAGGCTTTAGCGAAGTTATGAAGGAGTTATTCTCATGCTTTGTGAAGACAGAGAAGAAGGAATATGATTCCCATTCTCATTCTCATTCTCATTCTCAACCCGATCTTGATCTTGTTGATACCTCCAAGAAGCCCTCTCCTAAGAGGACTTCCACCAAGGACCGCCACACCAAAGTCGACGGGCGTGGTCGTCGCACTCGAATGCCTGCTCTTTGTGCTGCTCGAGTTTTCCAACTCACCCGCGAGCTCGGCCACAAGTCCGACGGTGAAACCATCGAGTGGCTTCTTCAGCAAGCCGAACCTGCCGTCATCGCTGCCACCGGTACCGGTACCATACCTGCAAACTTCAACTCTCTCAATACATCGTTAAGAAGATCGACCACAAGCATTTCTTTACCGTCCCAACTAAGATCCTCGTCTTACTACCATCCCGGAGTGATGGCGTTCAACTCTCAACCAATCAACATGAATCCAATGACGCAAGCAAAAGAAGATCACTTCCCTGATCCGCAGCGCCAAATGGGGAGCTATCTGCTGCAACCGAGCACAGGGGCAATCCCGGCGAATATTCCGGCGAACTTCTGGATGTTTTCCGACGGGAACCTCGGCGGCGGAGGAGGCGAGTCTTTATGGAGGCTTCCGTCGGCCACCCAAGACGGCGCTTTATACAGAGGACAAAACTCCGGTGGTGGATTACGTTTCTCCAACCTGGCAGCTCCGTTGACGCTCCTCCCGGGGAAGCCATTGGGACCCACCGTGAATAATGATGGACAGTTGAATATCTACGCCGGGCAAAATCCGCCGCATGGGGCGGCGCCGGACACCGGGATATCGTAA | 1029 | 52.48 | MRKALSGSKEFFEYPLDCKLAASPQPTAPLPAGYGRPPDNSPDKNEFFMMAPPDSTFNVFPSNPKGFSEVMKELFSCFVKTEKKEYDSHSHSHSHSQPDLDLVDTSKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSTTSISLPSQLRSSSYYHPGVMAFNSQPINMNPMTQAKEDHFPDPQRQMGSYLLQPSTGAIPANIPANFWMFSDGNLGGGGGESLWRLPSATQDGALYRGQNSGGGLRFSNLAAPLTLLPGKPLGPTVNNDGQLNIYAGQNPPHGAAPDTGIS | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 69524841 | 69530178 | + | Hsped.07g25190.1 | Hepe07g2519 | 575914 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g2519 | 342 | ProSiteProfiles | TCP domain profile. | 116 | 170 | IPR017887 | - | |
Hepe07g2519 | 342 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 95 | 221 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER) | |
Hepe07g2519 | 342 | MobiDBLite | consensus disorder prediction | 88 | 128 | - | - | |
Hepe07g2519 | 342 | Gene3D | - | 1 | 85 | IPR027443 | - | |
Hepe07g2519 | 342 | Pfam | TCP family transcription factor | 114 | 212 | IPR017887 | - | |
Hepe07g2519 | 342 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
Hepe07g2519 | 342 | SUPERFAMILY | Clavaminate synthase-like | 2 | 82 | - | - | |
Hepe07g2519 | 342 | MobiDBLite | consensus disorder prediction | 319 | 342 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0200 | Hepe-Chr7:1767012 | Hepe07g2519 | Hepe-Chr7:69524841 | 5.32e-29 | dispersed | |
Hepe07g2519 | Hepe-Chr7:69524841 | Hepe10g1486 | Hepe-Chr10:51695896 | 1.59e-38 | dispersed | |
Hepe10g1732 | Hepe-Chr10:54154477 | Hepe07g2519 | Hepe-Chr7:69524841 | 3.12e-55 | wgd | |
Hepe07g2519 | Hepe-Chr7:69524841 | Hepe09g0125 | Hepe-Chr9:998999 | 3.40e-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56064 | PF03634 | TCP | 1.40E-35 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g2519 | - | - | - | 0.0 |