Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2555 ATGGATTTCGCTTCGGAATCGGCTACTAAGTCTAGATACTTGGAAATGGCTGCTTTTGAAAAAGACGATATACCAATGCTATCAAACACTGATCCACCAATGTTAGATGACCAAGTGAATTCTTATTTTCCTTCATATGCATCATTGGCCCGGAGTTCATCACTATCAATTCCAACAACTTCTTCTGGGATGTATGGTACTGAAGCGAATCTTGTTGGTCATACTGGTCCCCTGCGAATTAAAAAAAAAAGTTCATTCATGGTGAGTGGTTCAAAATATACTGGCCGTAAACCTGAAAATCTTTCACAGTCAAATTCAGGTGTGATTGAAAGCAAAACTGCAGAGCCATTAGCAGACAAATTTCCTTCTTTCAATATGAAGGATGAGTCTGATTGGTCCATTCATAGCTATGCTGGCAGAAACGAACACTTAATAAGGTCTGGCCAGCTGGGAGTGTGCGATGATCCTTTCTGTATAACTTGCCCAACATATAATTTCAAAGCATCGCAACAGAAAAGCTCAAGAATGTTAGGCATATTTGATCCCGAGTTTCATAACGATCTCTATGGAGAAGGGAAAGGTTGGGCAGGGAAGTTTCGGTCCTTCTGGTGCTTCTGGCTTCCATATATTCCTGGAGTTATGAATCCTCATAAAAAAGTTGTTCAGCACTGGAACAAGTTTTTTGTCATTTCTTGCTTAGTGGCGATCTTCTTGGACCCATTATTTTTCTTCTTGCTTGCTGTCAAAAAGGATAATAAGTGCATATTTATTAATTGGCAAATGACCACAACATTGGTGGTTTTCCGAAGCATGACCGATTTTATCTATTTCCTACACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCACCAGAATCCAGAGTTGTTGGTGCAGGCGAATTAGAAGACCATCCGAAGAAAATTGCTATGAATTACCTTAAAGGAAATTTTTTAATAGATTTGCTTGTTATTTTGCCGCTGCCTCAGATAATAGTTTTTATGGTCCTGCCAAAGTCTTTGGGGACATCTGGAGCAAATTATGCAAAAAATCTATTACGCACTGCAGTTATTGTTCAATATATTCCCAGAATGTATAGGTTTCTACCTCTTCTTGCTGGCCAGTCTTCAAGTGGCTTTGTATTTGAGACAGCATGGGCAAATTTTGTCATCAATCTTCTCACCTTTATGTTGGCTGGTCATATTGTTGGGTCTTTCTGGTACCTCTTTGGGCTTCAGGGGGTGAACCGATGTTTTCGAGAAGCCTGCAATAACACTGGAAGTACTTTATGCTCAGAATATATAGATTGTGGCCACGGGGATGAAGCTGGGAGTAAAAGTCAGGATCCACAGTGGGTAACATGGACAAAAAATGAGAATGCTTCGGCATGTTTTGCTAAAGAAGGTTTTGATTATGGAGTCTACCTTCAGGCTGTAAATCTTACTACAGAAAATAGTATAATCACCAGATATACTTACTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAACCAAGTTCCGAGCTATTATGTTTATGAAGTCCTTTTCACTATGGGTATTGTTGGGCTTGGTCTATTGCTGTTTGCTCTTCTCATCGGGAATATGCAGAACTTTCTCCTGTCTCTTGGAAGAAGGAGGTTAGAAATGTCACTAAGACGTCGTGATGTTGAGCAGTGGATGGAGCATCGTCGCTTGCCACAAAATTTAAGAAGGCAAGTACGACAGGCTGAAAGGTACAATTGGGCTTCTACAAGAGGCGTAAATGAAGAAAGTATTTTCGAAAATTTGCCTGAGGACCTACAAAGAAACATAAGACGACATCTCTTTAAATTTGTCAACAAGGTTCGAATTTTTGCACTGATGGACTATGAGCCTATTTTAGATGCAATACGTGAGAGACTGCGGCAAAAGACGTATATAGAAGGAAGTGAAGTTTTTTCTGCTGGAGATATCATTGAGAAGATGGTTTTCATTGTACGGGGGAAAATGGAGAGCCGTGTAGATGGGAATGGGATTGTGGTTCCCTTATCTGTAGGAGATGTCTGCGGTGAGGAACTTCTAACATGGTGTCTTGAGCATTCCTCCATAAACAGAGATATAAGGCGACATCACGTTCCAGCACAAAGATTGGTCAGCAACCGGACAGTAAAGTGCTTATCAAATGTTGAAGCATTTTCTCTCCGGGCTGAAGACCTTGAAGAAGTGACTAGTATGTTTTCTAGATTCTTGCGAAATCCACGCGTTCAGGGAGCCATAAGGTACGAATCACCCCATTGGAGGCACCTAGCGGCAACGCGTATCCAAGAAGCTTGGAGATACAGGAAAAGGCGTCTATCTCGAGCTCAAACCTCTTAA 2364 41.12 MDFASESATKSRYLEMAAFEKDDIPMLSNTDPPMLDDQVNSYFPSYASLARSSSLSIPTTSSGMYGTEANLVGHTGPLRIKKKSSFMVSGSKYTGRKPENLSQSNSGVIESKTAEPLADKFPSFNMKDESDWSIHSYAGRNEHLIRSGQLGVCDDPFCITCPTYNFKASQQKSSRMLGIFDPEFHNDLYGEGKGWAGKFRSFWCFWLPYIPGVMNPHKKVVQHWNKFFVISCLVAIFLDPLFFFLLAVKKDNKCIFINWQMTTTLVVFRSMTDFIYFLHMLLQFRLAYVAPESRVVGAGELEDHPKKIAMNYLKGNFLIDLLVILPLPQIIVFMVLPKSLGTSGANYAKNLLRTAVIVQYIPRMYRFLPLLAGQSSSGFVFETAWANFVINLLTFMLAGHIVGSFWYLFGLQGVNRCFREACNNTGSTLCSEYIDCGHGDEAGSKSQDPQWVTWTKNENASACFAKEGFDYGVYLQAVNLTTENSIITRYTYSLFWGFQQISTLAGNQVPSYYVYEVLFTMGIVGLGLLLFALLIGNMQNFLLSLGRRRLEMSLRRRDVEQWMEHRRLPQNLRRQVRQAERYNWASTRGVNEESIFENLPEDLQRNIRRHLFKFVNKVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIIEKMVFIVRGKMESRVDGNGIVVPLSVGDVCGEELLTWCLEHSSINRDIRRHHVPAQRLVSNRTVKCLSNVEAFSLRAEDLEEVTSMFSRFLRNPRVQGAIRYESPHWRHLAATRIQEAWRYRKRRLSRAQTS 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69967263 69994613 + Hsped.07g25550.1 Hepe07g2555 575950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2555 787 ProSiteProfiles cAMP/cGMP binding motif profile. 633 690 IPR000595 -
Hepe07g2555 787 SUPERFAMILY Voltage-gated potassium channels 216 542 - -
Hepe07g2555 787 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 209 782 - -
Hepe07g2555 787 Gene3D - 227 543 - -
Hepe07g2555 787 Gene3D Helix hairpin bin 548 612 - -
Hepe07g2555 787 Pfam Ion transport protein 226 540 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g2555 787 CDD CAP_ED 620 738 IPR000595 -
Hepe07g2555 787 Gene3D Jelly Rolls 618 744 IPR014710 -
Hepe07g2555 787 SUPERFAMILY cAMP-binding domain-like 548 746 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2555 Hepe-Chr7:69967263 Hepe08g0898 Hepe-Chr8:8194439 2.09e-125 dispersed
Hepe07g2555 Hepe-Chr7:69967263 Hepe06g0783 Hepe-Chr6:54472140 1.10e-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2555 K05391 - csv:101215903 1326.61