Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2573 ATGAGGTGTGGCATTGCATGTGGAGTAGCCCGTGGCATCAAGTACTTGCATTCTCAAGGCCCAAATGTTTCTCATGGAAACATAAAGTCATCCAACATCTTGCTCGCCAAACCCTATGATGCCCGAGTCTCTGATTTCGGCCTTGCACAACTGGTTGGCCCAGCCTCCAGTCCAAACAGAGTGGCGGGGTATCGTGCACCGGAGGTGACGGATCCTCGGAAAGTATCGCAGAAGGCAGATGTTTACAGCTTTGGCGTATTGGTGTTGGAACTTTTGACAGGAAAAGCTCCAAGTCATGCGGTGTTAAACGAGGAAGGGGTGGATCTACCGAGATGGGTGCAGTCAGTGGTGCAAGAGGAGTGGAGGTCGGAAGTTTTCGATGTCGAACTACTGAGGTATGAGAGTGTTGAAGAGGAGATGGTTCAAATGTTGGAGCTGGCTGTAGATTGTGCGGCACAGCATCCAGATAGACGGCCTTCAATGTATGAAGTGACGAGTCGCATCGAGGAGTTATGCCCTTCCTCCTCCTCCTCCCATTCTAATCCCCAGCAGGCAACAACACAATGTTGA 570 50.88 MRCGIACGVARGIKYLHSQGPNVSHGNIKSSNILLAKPYDARVSDFGLAQLVGPASSPNRVAGYRAPEVTDPRKVSQKADVYSFGVLVLELLTGKAPSHAVLNEEGVDLPRWVQSVVQEEWRSEVFDVELLRYESVEEEMVQMLELAVDCAAQHPDRRPSMYEVTSRIEELCPSSSSSHSNPQQATTQC 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 70213294 70213863 - Hsped.07g25730.1 Hepe07g2573 575968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2573 189 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Hepe07g2573 189 PANTHER OS05G0588300 PROTEIN 2 179 IPR050994 -
Hepe07g2573 189 SMART serkin_6 1 172 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2573 189 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 182 - -
Hepe07g2573 189 Pfam Protein kinase domain 7 165 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2573 189 SUPERFAMILY Protein kinase-like (PK-like) 2 169 IPR011009 -
Hepe07g2573 189 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2573 Hepe-Chr7:70213294 Hepe09g0729 Hepe-Chr9:6950197 3.22e-65 dispersed
Hepe07g2573 Hepe-Chr7:70213294 Hepe07g2340 Hepe-Chr7:67769684 4.26e-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73004 PF00069 Pkinase 2.70E-24 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2573 - - - 0.0