Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2574 ATGGATAAGGAATTGAAGCTTTGGCTATGGCTATGGCTATGGCTTCTTCCCTTTCTTTTCATCATTCCCGTTGTTGAACCAGATCTGAGTTCTGATCGAGCTTCTCTTCTCGCTTTTCGTACTGCTGTCGGCGGCCGAACCACTGAGCTATGGAATGCAACCGATGAAAACCCCTGCTCCTGGGCTGGCATCAAATGCCAAGGTAATCGTGTCACTGTTCTTCGCTTACCCGGCGTTTCTCTCTCCGGCCAAATCCCCCCTGGCATTTTCCCAAATTTGACCAATCTCCGCACTCTCAGTCTCAGATTCAACGCATTAACCGGTCATCTTCCTTCAGATCTTGCTGCATGCACTACTCTTCGCAACCTCTACTTACAGGGTAATGCATTTTCCGGTCATATTCCCGACTTGCTTTTCCAATTTCATCACCTTGTTCGCCTTAACTTGGCTTCCAACAACTTCTCCGGCCTCATTCCTCCCGGTTTTGACAAACTCCCGCGCTTGAAGACCCTCTTCCTTGAGAACAATCGCCTCATTGGCTCAATACCCGAATTAAACCTCCCCAACCTCCAGCAGTTCAATGTTTCCAACAATTTCCTCAACGGATCGATTCCCCGTCGTTTGCAGCCATTTCCCTCTACTTCCTTTCTGGGTAACCAACTTTGCGGCCGTCCCCTTCAGACTTGCTCTCGGAATAATGTCATTGCACCACTCACTGTGGATATTGACGTTGACGAGAACAAGAGAAAGAAAGCCCTATCTGGGTCTGCAATTGCTGGGATTGTGATGGCGTCCGTACTGAGTTTCATTTTGTTTTGTGCGATTTTGATGTTTTCTTGCCGGAAGAAGAGCAGTCAGAAAACAACTACTCTGGACATGACACCCCTTGGGCTTGATATACCACCAGAGAAGCTGATTAACGAAGAGAATGGCCACGAAGACGTCCAGAATAGGAAAGGGGAAGTAAATGAAAACATTGTTGCTGGTGCCAAAAAGTTGGTATTCTTCGGCAATGCAGCAAGGGTGTTTGATTTGGAGGATTTGTTGAGGGCTTCAGCAGAAGTGTTGGGTAAGGGAACTTTTGGAACAGCCTACAAAGCAGTATTGGAGATAGGGCCTGTGGTGGCTGTAAAGAGATTGAAGGATGTGACCATTTCTGAGAGAGAATTCAGGGAGAAAATTGAAGCTGTGGGAGCAATGGATCATCAAAATTTGGTTCCTCTTAGAGCATATTATTACAGCGTAGATGAGAAGCTTCTGGTCTATGATTACATGGCCATGGGAAGCTTATCTGCACTTTTGCATGGTAACCTATTCTTTTTTAATGATTCTGTCTTCTTGGATATAATTTTTTTTCATTGCTAG 1365 45.79 MDKELKLWLWLWLWLLPFLFIIPVVEPDLSSDRASLLAFRTAVGGRTTELWNATDENPCSWAGIKCQGNRVTVLRLPGVSLSGQIPPGIFPNLTNLRTLSLRFNALTGHLPSDLAACTTLRNLYLQGNAFSGHIPDLLFQFHHLVRLNLASNNFSGLIPPGFDKLPRLKTLFLENNRLIGSIPELNLPNLQQFNVSNNFLNGSIPRRLQPFPSTSFLGNQLCGRPLQTCSRNNVIAPLTVDIDVDENKRKKALSGSAIAGIVMASVLSFILFCAILMFSCRKKSSQKTTTLDMTPLGLDIPPEKLINEENGHEDVQNRKGEVNENIVAGAKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEIGPVVAVKRLKDVTISEREFREKIEAVGAMDHQNLVPLRAYYYSVDEKLLVYDYMAMGSLSALLHGNLFFFNDSVFLDIIFFHC 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 70214264 70215628 - Hsped.07g25740.1 Hepe07g2574 575969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2574 454 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524(InterPro)
Hepe07g2574 454 SUPERFAMILY L domain-like 52 216 - -
Hepe07g2574 454 Pfam Leucine rich repeat 72 129 IPR001611 GO:0005515(InterPro)
Hepe07g2574 454 Pfam Leucine rich repeat 134 178 IPR001611 GO:0005515(InterPro)
Hepe07g2574 454 PANTHER OS05G0588300 PROTEIN 10 437 IPR050994 -
Hepe07g2574 454 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Hepe07g2574 454 FunFam Probable inactive receptor kinase RLK902 29 186 - -
Hepe07g2574 454 ProSiteProfiles Protein kinase domain profile. 350 454 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2574 454 SUPERFAMILY Protein kinase-like (PK-like) 354 444 IPR011009 -
Hepe07g2574 454 FunFam pollen receptor-like kinase 1 319 424 - -
Hepe07g2574 454 Pfam Leucine Rich Repeat 189 209 IPR001611 GO:0005515(InterPro)
Hepe07g2574 454 Pfam Protein kinase domain 354 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g2574 454 Gene3D Ribonuclease Inhibitor 31 138 IPR032675 -
Hepe07g2574 454 Gene3D Ribonuclease Inhibitor 139 231 IPR032675 -
Hepe07g2574 454 Gene3D Phosphorylase Kinase; domain 1 318 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2574 Hepe-Chr7:70214264 Hepe08g2570 Hepe-Chr8:67362052 5.79e-57 dispersed
Hepe07g2574 Hepe-Chr7:70214264 Hepe07g2340 Hepe-Chr7:67769684 1.45e-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73005 PF00069 Pkinase 5.40E-10 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2574 - - - 0.0