Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g2577 | ATGAGCCCATGGGCCAGTGCAGGCTCAACCCAAGCCCAGAACACGTTGCTTTTGGCGGGAAAATGTGAGATTTCGGCGCCAAAAGTGCAAACCCAAACCTTTACCTTCATTCTTCACTCACAATCCTTGAATCCTCCAACGATACACAACCAAACCAAAGATATGGAGAGCCATGGAGCCGGTAGTTATTTCGTGGATGAGAAGGCCGTTCTCGTCGAGAACATTTTCTTCGAATTCCTCAAGAGTTTTCGCCTCAATGGGAACTCTGGAGACCCTTACTACGAGGCAGAGATTGAAGCTATGATGGCTGGCGAATCTAACACCATGTTTATTGATTTCGCTCACCTCATGCACTCCAATGATCTTCTTCACATAGCAATCGCCGACGAATATCTGAGGTTTGAACCATACCTCAAGAACGCTTGTAAGCGATTCGTAATGGAGCAGAATCCTTCTTTCATCGCTGACGATAACCCCTTCAAGGACATAAATGTCGCTTTCTTCAACATTCCTGTCTCTAAAAGGTTGAGAGAGTTGACTACTGCAGAAATTGGGAAATTAGTATCTGTGACAGGAGTGGTGACGCGGACAAGCGAGGTCCGACCAGAGCTTCTACAAGGGACCTTCAAGTGCTTAGAATGTGGAAATGTCATAAAGAATGTCGAACAACAATTTAAGTACACGGAGCCAACAATATGCATGAACCCAACCTGTTCGAATAGAACAAGGTGGGCATTACTTCGACAAGAGAGTAAATTCGCTGATTGGCAGAGGGTGCGAATGCAAGAAACGTCAAAGGAGATACCGGCTGGCTCTCTTCCACGATCTTTGGATGTTATTCTTCGCCATGAGATGGTCGAACGTGCTAGGGCTGGAGATACGGTCATCTTCACGGGTACCGTAGTTGTTGTACCAGATATATTAGCATTAGCCTCTCCAGGAGAAAGAGCAGAATGTCGACGAGAAGCTTCAGAGCGAAGTAACTCTGCGGTTGGACACGAAGGAATGAGGGGGCTACGAGCACTAGGAGTGAGGGACTTGTCCTATCGCCTAGCCTTTATTGCCAATTCAGTTCAGGTTTTAGATGGCAGAAGGGATTTTGATATCAGAAACAGGAAAAAGGATGCGGATGAAGATAACCAACAATTTACCACTGGAGAGCTTGATGAAGTTCAAAGAATGAGGAATACACCTGACTTTTTCAACAGACTTATTGATAGCATTGCACCAGCAGTCTTTGGCCATCAAGATATCAAGCGAGCAATCCTGTTGATGCTGTTAGGTGGCGTCCACAAGTTAACTCATGAAGGCATTAACCTTCGAGGTGACATCAATGTTTGTATAGTAGGAGATCCAAGCTGTGCAAAATCTCAGTTTCTTAAGTATACTTCAGGTATTGTGCCAAGATCAGTTTACACATCTGGAAAGTCCTCTTCTGCTGCTGGATTGACTGCAACTGTAGCCAAAGAACCAGAAACTGGAGAGTTTTGTATTGAGGCTGGTGCCTTGATGCTTGCTGACAATGGCATTTGCTGTATTGATGAATTTGACAAAATGGACGTCAGGGATCAGGTTGCAATTCATGAAGCTATGGAGCAGCAGACCATAAGCATAACAAAAGCCGGAATACAGGCAACACTAAATGCTAGGACATCAATCCTTGCTGCTGCTAATCCTACAGGAGGGCGGTATGACAAGTCTAAACCACTGAAGTATAATGTTGCTCTGCCTCCTGCTATTCTCTCAAGGTTCGACCTCGTGTACGTGATGATAGATGACCCAAATGATCAAACAGATTACCACATTGCACACCACATTGTCAGAGTACATCAGAAGCATGAAGATGCTCTTTCTCCTGCATTTACTACTGCCGAGTTGAAACGTTATATTGCTTATGCAAAAACTCTAAAACCAAAGTTAAGTTTAGAAGCCAGAAAGGTATTGGTAGACTCTTATGTTGCTCTTCGGAGAGGAGATACAACTCCTGGAAGTAGGGTTGCCTATCGCATGACAGTCAGGCAGCTTGAGGCATTAGTAAGGCTGTCCGAAGCAATTGCACGTAGTTATTTGGAGACTCTGGTTCAATCGCGCCATGTGCGTTTAGCAGTGACGTTACTGAAAACGTCAATAATCAGTGTGGAATCTAGCGAGATTGACCTATCTGAATTTCAAGAAGAAACTAATGGCGGTGGAGATGGTAATAATAATGTCGACAATGGACCTAATGAGGTTGATGCCGAACCTAGGAATGGTGCACCAGAGCCACCTACTTCTGGAAATGGTGAAATGGGTTCAGATTCTGGAAGTAAACACGAGGAGAAGAAACTTACCCTGAGTTATGAATATTTTCAGAGGGTTACCCAAGCCCTTGTCATGCGCCTCAGACAGCACGAAGAATTAGTGATGCAAGAAGGAAATGAGCTGGCAGGAATGAGGCAGAGAGACTTAATTGAATGGTATGTGAATCAACAGAACGATAGAAATAGCTATAGCTCCGTGGAAGAGGTAGAAAATGAAGTAAAATTAATTAGAGCTATTATCCAGAGTTTGATACGAAAGGAAGGGCATTTGATAGTGGTAGATGACGGGAGGGCAGTAGGTGGCGAGGTTGAAGGCGAACCATCTTCGTTAAACAGGAATAACAGGATTTTAGCTGTGGCTCCTAATTATGTGGTTGATTAG | 2682 | 44.33 | MSPWASAGSTQAQNTLLLAGKCEISAPKVQTQTFTFILHSQSLNPPTIHNQTKDMESHGAGSYFVDEKAVLVENIFFEFLKSFRLNGNSGDPYYEAEIEAMMAGESNTMFIDFAHLMHSNDLLHIAIADEYLRFEPYLKNACKRFVMEQNPSFIADDNPFKDINVAFFNIPVSKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFKCLECGNVIKNVEQQFKYTEPTICMNPTCSNRTRWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEMVERARAGDTVIFTGTVVVVPDILALASPGERAECRREASERSNSAVGHEGMRGLRALGVRDLSYRLAFIANSVQVLDGRRDFDIRNRKKDADEDNQQFTTGELDEVQRMRNTPDFFNRLIDSIAPAVFGHQDIKRAILLMLLGGVHKLTHEGINLRGDINVCIVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDVRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPNDQTDYHIAHHIVRVHQKHEDALSPAFTTAELKRYIAYAKTLKPKLSLEARKVLVDSYVALRRGDTTPGSRVAYRMTVRQLEALVRLSEAIARSYLETLVQSRHVRLAVTLLKTSIISVESSEIDLSEFQEETNGGGDGNNNVDNGPNEVDAEPRNGAPEPPTSGNGEMGSDSGSKHEEKKLTLSYEYFQRVTQALVMRLRQHEELVMQEGNELAGMRQRDLIEWYVNQQNDRNSYSSVEEVENEVKLIRAIIQSLIRKEGHLIVVDDGRAVGGEVEGEPSSLNRNNRILAVAPNYVVD | 893 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 70269433 | 70276265 | - | Hsped.07g25770.1 | Hepe07g2577 | 575972 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g2577 | 893 | MobiDBLite | consensus disorder prediction | 727 | 741 | - | - | |
| Hepe07g2577 | 893 | FunFam | DNA helicase | 203 | 254 | - | - | |
| Hepe07g2577 | 893 | SUPERFAMILY | Nucleic acid-binding proteins | 76 | 306 | IPR012340 | - | |
| Hepe07g2577 | 893 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 71 | 829 | IPR031327 | GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:1902969(PANTHER)|GO:1990518(PANTHER) | |
| Hepe07g2577 | 893 | FunFam | DNA helicase | 771 | 893 | - | - | |
| Hepe07g2577 | 893 | ProSiteProfiles | MCM family domain profile. | 400 | 606 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | SMART | mcm | 172 | 711 | IPR031327 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 410 | 711 | IPR027417 | - | |
| Hepe07g2577 | 893 | Pfam | MCM P-loop domain | 388 | 610 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 501 | 515 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 529 | 542 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 553 | 565 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 441 | 456 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 580 | 588 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe07g2577 | 893 | ProSitePatterns | MCM family signature. | 509 | 517 | IPR018525 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0006260(InterPro) | |
| Hepe07g2577 | 893 | Pfam | MCM6 C-terminal winged-helix domain | 774 | 891 | IPR041024 | - | |
| Hepe07g2577 | 893 | Pfam | MCM AAA-lid domain | 625 | 710 | IPR041562 | - | |
| Hepe07g2577 | 893 | Gene3D | - | 772 | 893 | - | - | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 131 | 143 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 276 | 287 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 335 | 356 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 223 | 240 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe07g2577 | 893 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 173 | 185 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe07g2577 | 893 | Gene3D | - | 386 | 715 | IPR027417 | - | |
| Hepe07g2577 | 893 | FunFam | DNA helicase | 385 | 715 | - | - | |
| Hepe07g2577 | 893 | Pfam | MCM N-terminal domain | 75 | 169 | IPR027925 | - | |
| Hepe07g2577 | 893 | CDD | MCM6 | 403 | 709 | - | - | |
| Hepe07g2577 | 893 | Gene3D | - | 203 | 254 | - | - | |
| Hepe07g2577 | 893 | Gene3D | - | 176 | 304 | IPR012340 | - | |
| Hepe07g2577 | 893 | Pfam | MCM OB domain | 176 | 304 | IPR033762 | - | |
| Hepe07g2577 | 893 | Coils | Coil | 833 | 853 | - | - | |
| Hepe07g2577 | 893 | Gene3D | - | 64 | 172 | - | - | |
| Hepe07g2577 | 893 | MobiDBLite | consensus disorder prediction | 724 | 772 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g2123 | Hepe-Chr4:76012746 | Hepe07g2577 | Hepe-Chr7:70269433 | 0.0 | dispersed | |
| Hepe07g2577 | Hepe-Chr7:70269433 | Hepe09g1860 | Hepe-Chr9:59246345 | 0.0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g2577 | K02542 | - | csv:101219775 | 1491.09 |