Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g2577 ATGAGCCCATGGGCCAGTGCAGGCTCAACCCAAGCCCAGAACACGTTGCTTTTGGCGGGAAAATGTGAGATTTCGGCGCCAAAAGTGCAAACCCAAACCTTTACCTTCATTCTTCACTCACAATCCTTGAATCCTCCAACGATACACAACCAAACCAAAGATATGGAGAGCCATGGAGCCGGTAGTTATTTCGTGGATGAGAAGGCCGTTCTCGTCGAGAACATTTTCTTCGAATTCCTCAAGAGTTTTCGCCTCAATGGGAACTCTGGAGACCCTTACTACGAGGCAGAGATTGAAGCTATGATGGCTGGCGAATCTAACACCATGTTTATTGATTTCGCTCACCTCATGCACTCCAATGATCTTCTTCACATAGCAATCGCCGACGAATATCTGAGGTTTGAACCATACCTCAAGAACGCTTGTAAGCGATTCGTAATGGAGCAGAATCCTTCTTTCATCGCTGACGATAACCCCTTCAAGGACATAAATGTCGCTTTCTTCAACATTCCTGTCTCTAAAAGGTTGAGAGAGTTGACTACTGCAGAAATTGGGAAATTAGTATCTGTGACAGGAGTGGTGACGCGGACAAGCGAGGTCCGACCAGAGCTTCTACAAGGGACCTTCAAGTGCTTAGAATGTGGAAATGTCATAAAGAATGTCGAACAACAATTTAAGTACACGGAGCCAACAATATGCATGAACCCAACCTGTTCGAATAGAACAAGGTGGGCATTACTTCGACAAGAGAGTAAATTCGCTGATTGGCAGAGGGTGCGAATGCAAGAAACGTCAAAGGAGATACCGGCTGGCTCTCTTCCACGATCTTTGGATGTTATTCTTCGCCATGAGATGGTCGAACGTGCTAGGGCTGGAGATACGGTCATCTTCACGGGTACCGTAGTTGTTGTACCAGATATATTAGCATTAGCCTCTCCAGGAGAAAGAGCAGAATGTCGACGAGAAGCTTCAGAGCGAAGTAACTCTGCGGTTGGACACGAAGGAATGAGGGGGCTACGAGCACTAGGAGTGAGGGACTTGTCCTATCGCCTAGCCTTTATTGCCAATTCAGTTCAGGTTTTAGATGGCAGAAGGGATTTTGATATCAGAAACAGGAAAAAGGATGCGGATGAAGATAACCAACAATTTACCACTGGAGAGCTTGATGAAGTTCAAAGAATGAGGAATACACCTGACTTTTTCAACAGACTTATTGATAGCATTGCACCAGCAGTCTTTGGCCATCAAGATATCAAGCGAGCAATCCTGTTGATGCTGTTAGGTGGCGTCCACAAGTTAACTCATGAAGGCATTAACCTTCGAGGTGACATCAATGTTTGTATAGTAGGAGATCCAAGCTGTGCAAAATCTCAGTTTCTTAAGTATACTTCAGGTATTGTGCCAAGATCAGTTTACACATCTGGAAAGTCCTCTTCTGCTGCTGGATTGACTGCAACTGTAGCCAAAGAACCAGAAACTGGAGAGTTTTGTATTGAGGCTGGTGCCTTGATGCTTGCTGACAATGGCATTTGCTGTATTGATGAATTTGACAAAATGGACGTCAGGGATCAGGTTGCAATTCATGAAGCTATGGAGCAGCAGACCATAAGCATAACAAAAGCCGGAATACAGGCAACACTAAATGCTAGGACATCAATCCTTGCTGCTGCTAATCCTACAGGAGGGCGGTATGACAAGTCTAAACCACTGAAGTATAATGTTGCTCTGCCTCCTGCTATTCTCTCAAGGTTCGACCTCGTGTACGTGATGATAGATGACCCAAATGATCAAACAGATTACCACATTGCACACCACATTGTCAGAGTACATCAGAAGCATGAAGATGCTCTTTCTCCTGCATTTACTACTGCCGAGTTGAAACGTTATATTGCTTATGCAAAAACTCTAAAACCAAAGTTAAGTTTAGAAGCCAGAAAGGTATTGGTAGACTCTTATGTTGCTCTTCGGAGAGGAGATACAACTCCTGGAAGTAGGGTTGCCTATCGCATGACAGTCAGGCAGCTTGAGGCATTAGTAAGGCTGTCCGAAGCAATTGCACGTAGTTATTTGGAGACTCTGGTTCAATCGCGCCATGTGCGTTTAGCAGTGACGTTACTGAAAACGTCAATAATCAGTGTGGAATCTAGCGAGATTGACCTATCTGAATTTCAAGAAGAAACTAATGGCGGTGGAGATGGTAATAATAATGTCGACAATGGACCTAATGAGGTTGATGCCGAACCTAGGAATGGTGCACCAGAGCCACCTACTTCTGGAAATGGTGAAATGGGTTCAGATTCTGGAAGTAAACACGAGGAGAAGAAACTTACCCTGAGTTATGAATATTTTCAGAGGGTTACCCAAGCCCTTGTCATGCGCCTCAGACAGCACGAAGAATTAGTGATGCAAGAAGGAAATGAGCTGGCAGGAATGAGGCAGAGAGACTTAATTGAATGGTATGTGAATCAACAGAACGATAGAAATAGCTATAGCTCCGTGGAAGAGGTAGAAAATGAAGTAAAATTAATTAGAGCTATTATCCAGAGTTTGATACGAAAGGAAGGGCATTTGATAGTGGTAGATGACGGGAGGGCAGTAGGTGGCGAGGTTGAAGGCGAACCATCTTCGTTAAACAGGAATAACAGGATTTTAGCTGTGGCTCCTAATTATGTGGTTGATTAG 2682 44.33 MSPWASAGSTQAQNTLLLAGKCEISAPKVQTQTFTFILHSQSLNPPTIHNQTKDMESHGAGSYFVDEKAVLVENIFFEFLKSFRLNGNSGDPYYEAEIEAMMAGESNTMFIDFAHLMHSNDLLHIAIADEYLRFEPYLKNACKRFVMEQNPSFIADDNPFKDINVAFFNIPVSKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFKCLECGNVIKNVEQQFKYTEPTICMNPTCSNRTRWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEMVERARAGDTVIFTGTVVVVPDILALASPGERAECRREASERSNSAVGHEGMRGLRALGVRDLSYRLAFIANSVQVLDGRRDFDIRNRKKDADEDNQQFTTGELDEVQRMRNTPDFFNRLIDSIAPAVFGHQDIKRAILLMLLGGVHKLTHEGINLRGDINVCIVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDVRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPNDQTDYHIAHHIVRVHQKHEDALSPAFTTAELKRYIAYAKTLKPKLSLEARKVLVDSYVALRRGDTTPGSRVAYRMTVRQLEALVRLSEAIARSYLETLVQSRHVRLAVTLLKTSIISVESSEIDLSEFQEETNGGGDGNNNVDNGPNEVDAEPRNGAPEPPTSGNGEMGSDSGSKHEEKKLTLSYEYFQRVTQALVMRLRQHEELVMQEGNELAGMRQRDLIEWYVNQQNDRNSYSSVEEVENEVKLIRAIIQSLIRKEGHLIVVDDGRAVGGEVEGEPSSLNRNNRILAVAPNYVVD 893
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 70269433 70276265 - Hsped.07g25770.1 Hepe07g2577 575972
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g2577 893 MobiDBLite consensus disorder prediction 727 741 - -
Hepe07g2577 893 FunFam DNA helicase 203 254 - -
Hepe07g2577 893 SUPERFAMILY Nucleic acid-binding proteins 76 306 IPR012340 -
Hepe07g2577 893 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 71 829 IPR031327 GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:1902969(PANTHER)|GO:1990518(PANTHER)
Hepe07g2577 893 FunFam DNA helicase 771 893 - -
Hepe07g2577 893 ProSiteProfiles MCM family domain profile. 400 606 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 SMART mcm 172 711 IPR031327 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 711 IPR027417 -
Hepe07g2577 893 Pfam MCM P-loop domain 388 610 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein family signature 501 515 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein family signature 529 542 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein family signature 553 565 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein family signature 441 456 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein family signature 580 588 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Hepe07g2577 893 ProSitePatterns MCM family signature. 509 517 IPR018525 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0006260(InterPro)
Hepe07g2577 893 Pfam MCM6 C-terminal winged-helix domain 774 891 IPR041024 -
Hepe07g2577 893 Pfam MCM AAA-lid domain 625 710 IPR041562 -
Hepe07g2577 893 Gene3D - 772 893 - -
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 131 143 IPR008049 GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 276 287 IPR008049 GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 335 356 IPR008049 GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 223 240 IPR008049 GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)
Hepe07g2577 893 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 173 185 IPR008049 GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)
Hepe07g2577 893 Gene3D - 386 715 IPR027417 -
Hepe07g2577 893 FunFam DNA helicase 385 715 - -
Hepe07g2577 893 Pfam MCM N-terminal domain 75 169 IPR027925 -
Hepe07g2577 893 CDD MCM6 403 709 - -
Hepe07g2577 893 Gene3D - 203 254 - -
Hepe07g2577 893 Gene3D - 176 304 IPR012340 -
Hepe07g2577 893 Pfam MCM OB domain 176 304 IPR033762 -
Hepe07g2577 893 Coils Coil 833 853 - -
Hepe07g2577 893 Gene3D - 64 172 - -
Hepe07g2577 893 MobiDBLite consensus disorder prediction 724 772 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2123 Hepe-Chr4:76012746 Hepe07g2577 Hepe-Chr7:70269433 0.0 dispersed
Hepe07g2577 Hepe-Chr7:70269433 Hepe09g1860 Hepe-Chr9:59246345 0.0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g2577 K02542 - csv:101219775 1491.09