Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0008 ATGAAGCAATGGAGATGCCTAAATTCAGAATCTACTGCAACCTTATGGGTATTGTGCACGGCTCTAGCTCTAGCTCTACCTCCAATTCTCGGATCAGTCTCATCTCCAAACCACCAACTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCCAACATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAACGCTCAGCTTAACGATGACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAGTGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTGTTGTTGTTTTCTTCGAGGGTGAACGACGGTATTTGTGATTGTTGTGACGGAAGTGACGAATTTGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAGCTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTGCAACCTTTGAAGATGGTGTGAAAATTCGAAAACAAGAAATTGAACATGCAAAAGTCGCAATAACCCAGGACGAGGCAGAGATATTGAAGTTGAAAAACGAGGAAAAAGTATTGAAAGGGCTCGTTGAACAACTTAAAGAGCGCAAAGAACAAATAGAGAAAGTAGAACAGGAGGAGCGATTACGGAAAGAAAAAGAAGAGAAGAAACATTTGGAGACAGAAAAAGATGAGACTAAAAAAACTGAGTCGACAGAAACAACTAATGTTGGGGAAAGCAAAACTCAAGAGGAAGACAATTGGGAAAAAAATGAAGCTATAGAAAATGATGACAAAGAATATAGACAAGGAGAAGGCAACAATGATGATAAAATTGGGGACTGGAAGCACTCTGCCACAGATCAGGATAGGGTGGAAGAAGTTGACTCGGAACTTGAAGCCCAACTTATGAATAAACCTGGAACTGAAGCATCGTTGCTGAAAGAGGAAACAACAGTAGAGAAAGACAAACCCCTGTCTAAATCTGAAACTGGAGAAAGTGCTGGCACTAAAGAATCATCTGAAGAAGTCCTGAGAAAGAATGATGCTAGTTCAGAGGAGTTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAACAACAGTCCGGGAATGTGGATAGTACGAATGATAGTGATGAAGAAAGTCATGATCTAAAAGACACCAATGACGGTTATGCTTCAGAGGCTGATGATGATAACCAAAGATACGATGATGACCTGGAGGACGATTTTGAAGATATCAGAGATGAAAATCATGATGATTCTACTTCGTCAGAGAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGAAACCCAAAGTAACCCCACCTGGGTTGAGAAGATACAAAAAACCGTTCGAAATGTCTTCAAAGCTGTTAATATATTCCAGTCTCCAGTGAATCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCTAGTGCCAGTTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAATTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGCAGAACAAATACATTTACAAAGTCTGCCCTTACAAACAAGCTTCGCAGGTTGAGGGGCACTCAACAACTCGTTTGGGGCGGTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCAAGTGGGGATACTTGCTGGAACGGACCCGATAGAAGCTTGAAGGTGAAGCTAAGATGTGGGCTTAAAAATGACGTAACCGATGTAGATGAACCAAGCCGTTGCGAATATGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGTTGGACATGCTGAACAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1923 41.65 MKQWRCLNSESTATLWVLCTALALALPPILGSVSSPNHQLRGISPQDEMYYKSSNMIKCRDGSNKFSNAQLNDDYCDCPDGTDEPGTSACPSGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEFDSKVKCPNTCWEAGKVARDKLKKKIATFEDGVKIRKQEIEHAKVAITQDEAEILKLKNEEKVLKGLVEQLKERKEQIEKVEQEERLRKEKEEKKHLETEKDETKKTESTETTNVGESKTQEEDNWEKNEAIENDDKEYRQGEGNNDDKIGDWKHSATDQDRVEEVDSELEAQLMNKPGTEASLLKEETTVEKDKPLSKSETGESAGTKESSEEVLRKNDASSEELSREELGRLVASRWTGENTEQQSGNVDSTNDSDEESHDLKDTNDGYASEADDDNQRYDDDLEDDFEDIRDENHDDSTSSERYYSDTELDSPDVETQSNPTWVEKIQKTVRNVFKAVNIFQSPVNQSDAANVRKEYDESSASLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKQNKYIYKVCPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDVTDVDEPSRCEYVALLSTPAACVEEKLQELKNKLDMLNKEEAEKHDEL 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 109868 119069 - Hsped.08g00080.1 Hepe08g0008 575980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0008 640 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 623 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Hepe08g0008 640 MobiDBLite consensus disorder prediction 208 448 - -
Hepe08g0008 640 Coils Coil 612 639 - -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 421 438 - -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 311 357 - -
Hepe08g0008 640 Pfam Glucosidase II beta subunit-like 33 173 IPR028146 -
Hepe08g0008 640 Coils Coil 165 232 - -
Hepe08g0008 640 Gene3D - 86 137 IPR036055 GO:0005515(InterPro)
Hepe08g0008 640 ProSiteProfiles MRH domain profile. 521 616 IPR044865 -
Hepe08g0008 640 Gene3D - 516 615 IPR009011 -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 380 402 - -
Hepe08g0008 640 SUPERFAMILY Mannose 6-phosphate receptor domain 521 614 IPR009011 -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 208 296 - -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 364 379 - -
Hepe08g0008 640 MobiDBLite consensus disorder prediction 403 420 - -
Hepe08g0008 640 Pfam Glucosidase II beta subunit-like protein 482 640 IPR036607 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0251 Hepe-Chr2:2514132 Hepe08g0008 Hepe-Chr8:109868 1.22e-29 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0008 K08288 - csv:101221877 1026.16