Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0036 ATGGATGATAAACATTTGCACTGGAGCCAGTGGCAACTGCTCGATTCTGTCCTTCCTACTGGTGGCTTCGCCCATTCGCTCGGTCTCGAGGCTGCAATACAAGCTCGCATTGTCTCACATCCAGAAGATCTCAAAACTTTTGTGATTCATGTATTGGACAATACTGCAAGTTTGCTTCTTCCCTTTGTGCATTCAGCCACACTATCTCCTGATTTAGAAACTTGGAAGAAAAATGACAGATTATTGGATGCAATGTTGACTAACGAAGTCAGTCGAAAGGCATCAGTTACGCAAGGGTCAGCTCTCCTGAGAGTTGCAGCAGTAGTATTTTCTGAAATCCCATCTCTGCAAACCATGAGGGAAACCTTCTCCCGGACCAGGGTTGTTTCGTTCCACCATGCTCCCATATTCGGGCTTATTTGCGGTCTACTCGGATGGGATAGCGCAATGTCACAGAGGGCTTATCTGTTTATTACCATGAGGGATGTTATTTCTGCTGCAACAAGACTGAATTTAGTAGGTCCTATGGGTGCAGCTGTGTTGCAGCATCAGCTTGCGCTTGTTGCTGAAGACGTATTGCAGAAATGGATGAATCGTCCCGTCGAAGAAGCTTGCCAAACCGTTCCTCTGTTAGAGACGAAATTGGTGGAGGCTATTGCTTGGGTCACGGAGGTGGAAGTGGTGGAGGCTACTGCTGTTAGGAATGCCTTGATCGTGGCGTTGGAGATGGAGTTTGATCGGCTGGAGGTGGAGACAAATTGCGGCCGAATTGTTCATCTTCTCCACAACTCCATCTCTGACTACTCTGACTTTGGAAGGATCATCGACGATATCAAAGCTTCCGCAGGAGGAAGCCCTAATCACCTCCTATTTCCTTCGCTCCCTTTCTCCCTCTCTCTTCTTCACCCGCACAACTCCCCAGCTGTCTTTTCATTTTCCGGCAGCAAACCCCCGCGACGGCGATATAGCCTCCATCCACCGGTGAGCCACGAGCTAAGCGACGGTGCGCTGAGCGTCTCCTCGACGGCGAAGCGGAACATCCACGAGCGACGCATTCCAGCGCTTCGACATAAGGTCTCCAAGGGAAGGAGAATACGTGTGCAAGGGAAGACTATGGCTATAACAGCACCAGGGCAGCTCAATGTTAACGAGTCCCCTTCGTGGGGATCTAGAGGTGTCGACTGCTTCGAAAAACTGGAGCAGATTGGCGAAGGCACTTACGGTCAAGTTTACATGGCCAGAGAATTACAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGATAATGAGAGGGAAGGGTTCCCTATTACTGCCATACGAGAAATCAAAATTCTAAAGAAGCTCCATCATGAAAATGTAATCAAGTTGAAAGAGATTGTGACATCTCCAGGTCCCGAGAAGGATGAACAAGGGAAGCCAGATGGTAACAAGTACAAAGGTGGCATCTACATGGTTTTTGAGTACATGGACCATGATTTGACTGGTCTTGCTGATCGTCCAGGGATGAGATTTTCAGTTCCCCAAATCAAGTGCTACATGAGGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTACTACATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGGTCATTTTCTAATGATCACAATGCAAATCTAACGAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTGCTTGGTTCAACAAAATATGGTCCAGCTGTAGACATGTGGTCCGTTGGTTGTATTTTTGCAGAGCTTTTACATGGGAAGCCAATATTCCCCGGCAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCTCCGGATGAAGTCAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAACAATTTCAAGCCCACGAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAACTGTTGGAGAAGATGCTCAATCTTGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGACGGGGAGTATTTTTGGACAGATCCATTACCTTGTGACCCTAAAAGTTTACCCAAGTATGAAGCATCACACGAGTTCCAGACAAAGAAGAAGCGTCAACAGCAGCGACAACAGGAAGAAACTGCAAAGCGACAGAAGTTGCAACAGCATGCACGCCTTCCACCTATTCAGCAGTCGGGGCAAGCTCATGCACAAATGCGACCGGTACCTAACCAACCTATTCATGGGTCTCAACCGCCAGTTGCTGCTGCCGGGCCTAGCCATCATTTTGGGGGGAAGCCTCGTGGACCCCCAGGTCCCGGTAGGTATCCCTCAGGTGGAAATCCTCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAGGTGCGGGTGGTTATGGCAATGCACAATATGCTCAAGGACGAGCTGCACCCTATGGGTCTGGTAACATGTCTGGTGCTGGTCCCCGAGGTGGAGCTGGAGCTGGAGCCGGTGGTGGTTATGGCGTGGGAGCTCCAAATTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGCCGTGGCTCCAATGCGATGGGTGGAAACCGAAACCAACAATATGGGTGGCAACAGTGA 2670 48.43 MDDKHLHWSQWQLLDSVLPTGGFAHSLGLEAAIQARIVSHPEDLKTFVIHVLDNTASLLLPFVHSATLSPDLETWKKNDRLLDAMLTNEVSRKASVTQGSALLRVAAVVFSEIPSLQTMRETFSRTRVVSFHHAPIFGLICGLLGWDSAMSQRAYLFITMRDVISAATRLNLVGPMGAAVLQHQLALVAEDVLQKWMNRPVEEACQTVPLLETKLVEAIAWVTEVEVVEATAVRNALIVALEMEFDRLEVETNCGRIVHLLHNSISDYSDFGRIIDDIKASAGGSPNHLLFPSLPFSLSLLHPHNSPAVFSFSGSKPPRRRYSLHPPVSHELSDGALSVSSTAKRNIHERRIPALRHKVSKGRRIRVQGKTMAITAPGQLNVNESPSWGSRGVDCFEKLEQIGEGTYGQVYMARELQTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLNLDPSQRISAKDALDGEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQQEETAKRQKLQQHARLPPIQQSGQAHAQMRPVPNQPIHGSQPPVAAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGAGGYGNAQYAQGRAAPYGSGNMSGAGPRGGAGAGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNAMGGNRNQQYGWQQ 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 270675 280922 + Hsped.08g00360.1 Hepe08g0036 576008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0036 889 Gene3D Urease accessory protein UreF 3 207 IPR038277 -
Hepe08g0036 889 MobiDBLite consensus disorder prediction 708 737 - -
Hepe08g0036 889 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524(InterPro)
Hepe08g0036 889 FunFam Cyclin-dependent kinase C-2 493 735 - -
Hepe08g0036 889 Coils Coil 720 740 - -
Hepe08g0036 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0036 889 SUPERFAMILY Protein kinase-like (PK-like) 392 703 IPR011009 -
Hepe08g0036 889 PANTHER CELL DIVISION PROTEIN KINASE 396 695 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe08g0036 889 Gene3D Phosphorylase Kinase; domain 1 383 492 - -
Hepe08g0036 889 ProSiteProfiles Protein kinase domain profile. 396 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0036 889 Gene3D Transferase(Phosphotransferase) domain 1 493 735 - -
Hepe08g0036 889 Pfam UreF 38 186 IPR002639 GO:0016151(InterPro)
Hepe08g0036 889 SMART serkin_6 396 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0036 889 CDD STKc_CDK9_like 396 695 - -
Hepe08g0036 889 FunFam Cyclin-dependent kinase C-2 383 492 - -
Hepe08g0036 889 Pfam Protein kinase domain 396 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0036 889 MobiDBLite consensus disorder prediction 706 889 - -
Hepe08g0036 889 MobiDBLite consensus disorder prediction 741 756 - -
Hepe08g0036 889 MobiDBLite consensus disorder prediction 861 889 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0036 Hepe-Chr8:270675 Hepe09g1602 Hepe-Chr9:46187710 8.74e-105 dispersed
Hepe08g0036 Hepe-Chr8:270675 Hepe07g1446 Hepe-Chr7:47922444 0.0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73006 PF00069 Pkinase 2.10E-74 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0036 K08819 - csv:101220936 915.22