Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0075 ATGCACAATACCTCACCAAAACCATCACAAGATTCCCATATAGAAAGAAAAGAAAAGAAAAGAAGAATGGGTTCCTTCAAAGCCATTGCTTTGTTTTTGTTTGTGGGGTTGACGATGGTGGGAGTTTGTAAAGCTCAGCTGTGCCCAACGTTTTACGATGACTCCTGCCCGGACATCTTCAACATTGTGCGAGGCGTGTTGGCAAAGGCTTTGTTGAACGACGACCGAGCGGCTGCCAGAGTCATTCGGCTCCATTTCCACGACTGCTTTGTTGACGGGTGTGATGGGTCGGTTTTGCTAGTGGACCAACCGGGCGTAGTGAGTGAACTTGAAGCCCTTGGAAACGCAAATATCACAGGATTTAACATTGTGAACGACATCAAAGCTGCGCTTGAAAAAGCTTGCCCTGGTGTTGTTTCCTGTGCGGACATCTTAGCCATAGCTTCCGTAGAAGCTGTTTCCTTGTCAGGAGGTCCGTGTTGGGAGGTTCAACTGGGAAGAAGAGACAGCCGAAGCGCGAACTTACAAGTGGCGAACACTAGCCTTCCAAGTCCCTTCGATCCTATTGACGTACTTAAACGCAAGTTCGATAGAGTTGGTCTTGATTCTACTGATCTTGTTGCTTTATCTGGTGCCCACACATTCGGACGTTCAAGATGCAGATTTTTCGACAGACGTTTGAACGTTTCAAACCCAGACAACACACTGGATGCATCCTACGCAAGCCAGCTCCGTGGAGCTTGTGCTAGCGGCAGAGACACCTTTGTGAACCTCGACCCGACCACTCCCGACGACTTCGACAACAACTACTTCACCAATCTTCAGTCCAACTTCGGCCTTCTCGGCAGCGACCAGGTCCTCTTCTCCACCCCCGGCGAGGACACCGTCGACATCGTCAACATCTTCGCCGCCAACCAACAGCAATTCTTCGACAGCTTTGGCCAGTCCATGATCAACATGGGAAACATCTCCCCTTTAACTGGTAACCAAGGGGAAATTAGGTCTCACTGCAGAAGACTCAACTGA 1026 49.61 MHNTSPKPSQDSHIERKEKKRRMGSFKAIALFLFVGLTMVGVCKAQLCPTFYDDSCPDIFNIVRGVLAKALLNDDRAAARVIRLHFHDCFVDGCDGSVLLVDQPGVVSELEALGNANITGFNIVNDIKAALEKACPGVVSCADILAIASVEAVSLSGGPCWEVQLGRRDSRSANLQVANTSLPSPFDPIDVLKRKFDRVGLDSTDLVALSGAHTFGRSRCRFFDRRLNVSNPDNTLDASYASQLRGACASGRDTFVNLDPTTPDDFDNNYFTNLQSNFGLLGSDQVLFSTPGEDTVDIVNIFAANQQQFFDSFGQSMINMGNISPLTGNQGEIRSHCRRLN 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 590124 593481 - Hsped.08g00750.1 Hepe08g0075 576047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0075 341 CDD secretory_peroxidase 46 339 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0075 341 Pfam Peroxidase 63 305 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 FunFam Peroxidase 183 320 - -
Hepe08g0075 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Hepe08g0075 341 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 Gene3D - 51 341 - -
Hepe08g0075 341 PANTHER PEROXIDASE 72-RELATED 37 339 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 SUPERFAMILY Heme-dependent peroxidases 46 341 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 MobiDBLite consensus disorder prediction 1 20 - -
Hepe08g0075 341 ProSiteProfiles Plant heme peroxidase family profile. 46 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 FunFam Peroxidase 50 194 - -
Hepe08g0075 341 Gene3D Peroxidase, domain 2 183 320 - -
Hepe08g0075 341 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0075 341 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0075 Hepe-Chr8:590124 Hepe08g0081 Hepe-Chr8:635614 9.93e-132 dispersed
Hepe08g0074 Hepe-Chr8:582489 Hepe08g0075 Hepe-Chr8:590124 3.76e-148 tandem
Hepe08g0075 Hepe-Chr8:590124 Hepe08g0076 Hepe-Chr8:600114 3.58e-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0075 K00430 - csv:101212717 508.064