Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0076 ATGGCCTCCTCCACCAATACCATGGCCTTGTTTTTCTTCTTGACTCTTTTCTTCGGAGGCTCTTTTGCTCAACTCTCCGAAAGCTTCTACGACAAATCCTGCCCTCGTCTCCCCAACATTGTCCGCGCCGCCGTCAAAAGAGCTATCGAAACCCAAGTCCGTGCTGGTGCTATGCTCATCCGCCTCCATTTCCACGACTGCTTCGTCAATGGGTGTGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGACAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGACTTGAGTTTGTTGATGCCATTAAAACCGCCGTCGAAAGCGAATGCCCCGGCATCGTCTCCTGCGCAGACATCCTAGCTCAGGCCTCTAAGGACTCTGTTGATCTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGAAGGGACAGCAGAATAGCGAACAGATCAGGGGCTGATTCTGGCCTCGCTAGTCCCTTCGAAACTCTCGACCAACTCAAAGCCAAATTTGCTGCTGTTGGTCTTAGTACCACTGATCTCGTTGCTTTATCTGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGTCACAGATTTGCGAACTTCAACAGCACAGGGAGGCCAGATCCATCACTGGACGCCAACTACAGGGGATTCCTACAAGGGGTTTGTTCAGCAGGTGCAGACACGAGAGCCAATTTCGACCCAACAACACCAGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGCTGGAAAGGGGCTTCTTCAAAGTGACCAAGAGCTGTTCTCCACTCCCGGGGCAGACACCATCGCCATTGTCAACAGCTTCGCCGCCAGAGAAGGAACTTTCTTCAAGGAATTCCGCCAGTCAATGATCAACATGGGTAATATCAAGCCGTTGACTGGCCGGCTCGGGGAAATCAGAAGAAACTGCAGGAGGGTCAACACCGGGATGGGTGGAGAAGGCCACGATGTTATGTAA 1005 51.24 MASSTNTMALFFFLTLFFGGSFAQLSESFYDKSCPRLPNIVRAAVKRAIETQVRAGAMLIRLHFHDCFVNGCDGSVLLEDAPGIDSELNSPGNQGIQGLEFVDAIKTAVESECPGIVSCADILAQASKDSVDLQGGPSWRVLYGRRDSRIANRSGADSGLASPFETLDQLKAKFAAVGLSTTDLVALSGAHTFGRSRCRFFSHRFANFNSTGRPDPSLDANYRGFLQGVCSAGADTRANFDPTTPDVFDKNYYTNLQAGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGRLGEIRRNCRRVNTGMGGEGHDVM 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 600114 601922 - Hsped.08g00760.1 Hepe08g0076 576048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0076 334 FunFam Peroxidase 28 174 - -
Hepe08g0076 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Hepe08g0076 334 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0076 334 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 Pfam Peroxidase 41 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 Gene3D - 29 323 - -
Hepe08g0076 334 PANTHER PEROXIDASE 72-RELATED 14 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0076 334 Gene3D Peroxidase, domain 2 161 302 - -
Hepe08g0076 334 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Hepe08g0076 334 FunFam Peroxidase 161 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0076 Hepe-Chr8:600114 Hepe08g0078 Hepe-Chr8:614497 5.87e-170 dispersed
Hepe08g0075 Hepe-Chr8:590124 Hepe08g0076 Hepe-Chr8:600114 3.58e-125 tandem
Hepe08g0076 Hepe-Chr8:600114 Hepe08g0077 Hepe-Chr8:610989 5.05e-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0076 K00430 - csv:101217781 571.237