Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0079 ATGGCTTCCCCTCAACTCACAGCCTTTGCTGTTGTGGCCGCCTTGATGCTATCAGCTGGGAGCTCTCACGCTCAACTTACCCCTTTCTTCTACGCCCGCACATGCCCTCAGCTGCCTTTCCTTGTTCTCGACGTTGTTGCACGAGCTCTACAAACCGACGACCGAGCCGCTGCCAAACTCATTCGCCTCCATTTCCACGACTGTTTCGTCAATGGATGTGACGGGTCGGTGCTACTGGTGGACGTACCGGGAGTGATCGATAGTGAACTAAACGGACCTCCAAATAATGGGATCCAAGGGATGGACATCGTGGACAACATCAAAGCAGCAGTTGAAAGGTCTTGCCCAGGCGTTGTTTCCTGTGCTGACATCTTAGCCATTTCGGCTCAAATCTCTGTTTTCTTGTCGGGAGGGCCAATTTGGGTGGTTCCACTGGGAAGAAAAGACAGCACCATAGCGAATAGAACCGGAACCTCAAATCTTCCGGGTCCGTCGGAAACTCTCACCGGGCTTAAAGCCAAGTTTGGGGTTCATGGGCTGGATGCTACGGATCTGGTGGCTCTATCAGGAGCCCACACGTTCGGGCGAGCGAGATGCCTTTTCTTCTCCGGGCGGTTCGACAACTTCAACAACACCGGCAGACCCGACCCGACGCTAGACGCGGCTTACAGGGAGCAGCTTCGGCGGCTCTGTACCACCCAACAGACACGAGTGAATTTCGATCCGGCGACGCCGACCAAATTCGACAAAGCATACTACACCAATCTGGTCGGCCTGAAGGGGCTTCTCCAAAGTGATCAAGAGCTGTTTTCAACGCCCAGGGCTGACACTACTGCCATCGTCCAAAACTTCGCGGCTGACGAGCGTGCTTTCTTTAAACAGTTTGTGAAATCGATGATCAAAATGGGGAATCTCAAGCCTCCATCCGGCATCAGATCACAAGTCAGATTAGACTGTAAGAGGGTCAACCCAGTGAGTGGCCATGATGTTATCTAA 996 53.11 MASPQLTAFAVVAALMLSAGSSHAQLTPFFYARTCPQLPFLVLDVVARALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLVDVPGVIDSELNGPPNNGIQGMDIVDNIKAAVERSCPGVVSCADILAISAQISVFLSGGPIWVVPLGRKDSTIANRTGTSNLPGPSETLTGLKAKFGVHGLDATDLVALSGAHTFGRARCLFFSGRFDNFNNTGRPDPTLDAAYREQLRRLCTTQQTRVNFDPATPTKFDKAYYTNLVGLKGLLQSDQELFSTPRADTTAIVQNFAADERAFFKQFVKSMIKMGNLKPPSGIRSQVRLDCKRVNPVSGHDVI 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 621209 622504 - Hsped.08g00790.1 Hepe08g0079 576051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0079 331 Pfam Peroxidase 44 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 FunFam Peroxidase 162 302 - -
Hepe08g0079 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0079 331 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Hepe08g0079 331 Gene3D - 30 323 - -
Hepe08g0079 331 PANTHER PEROXIDASE 72-RELATED 11 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Hepe08g0079 331 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0079 331 Gene3D Peroxidase, domain 2 162 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0079 Hepe-Chr8:621209 Hepe08g0081 Hepe-Chr8:635614 4.08e-138 dispersed
Hepe08g0078 Hepe-Chr8:614497 Hepe08g0079 Hepe-Chr8:621209 1.50e-131 tandem
Hepe08g0079 Hepe-Chr8:621209 Hepe08g0080 Hepe-Chr8:625448 2.65e-171 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0079 K00430 - csv:101211989 555.058