Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0080 ATGGCTTCCCCTAAACTTACAGCCTTTGTTCTGGTGGTAGCTTTGATGCTGTGCACTTCTCACGCTCAGCTTAACCCTTTCTTCTACGCCTTCACATGCCCTCAGCTGCCTTTTGTTGTCAAGAGAATCGTCTCACAAGCTCTACAAACCGACGATCGAGTCGCTGCAAAACTCATTCGTCTCCACTTTCACGACTGTTTTGTCAATGGATGTGACGGGTCGGTGCTATTGGAGGACGTACCCGGCGTGATCGATAGTGAATTAAACGCACTTCCAAACAATGGGATCCAAGGGATTGAGATTGTGGACAACATCAAAGCAGCAGTTGAAACTGCTTGCCCAGGGGTTGTTTCCTGTGCTGACATCTTAGCCATCGCCTCTCAAATCTCTGTCATTTTGTCAGGTGGGCCAGCTTGGGTGGTTCTACTAGGAAGAAGAGACAGCAGAATAGCCAACAGAGCCGCAGCCTCAAATCTCCCGAGTCCGTTTGAGACTCTGGATGCACTCAAAGCCAAATTCGCGGCTTTGGGGCTTGATTCTACGGATCTCGTGACTCTATCGGGAGCGCACACGTTCGGTCGATCGAGATGCTTATTCTTCACCGGAAGGTTCGACAACTTCAACAGCACAGGCCTTCCCGACCCGACTCTTGACCCTGTTTACCGAGAGCAGCTTCGTCAAGCTTGCACCACTCCAGTAACAAGAGTGAGCTTCGATCCGATCACACCAGACACATTCGACAAAAACTACTACATCAATCTCAAAAACCATCGAGGGCTTCTCCAGAGTGATCAGGAGCTTTTCTCAACCCCTGGGGCTGATACTACTGCCGTTGTCAACACATTTGCTGCTAGCCAGCTCGTGTTCTTTATTCAATTTGGGAATTCCATGATCAAAATGGGCAATCTCAGCCCTCCACCTGGCACCCCATCCGAAGTCAGATTGACCTGTGGAAAGCTCAACTCACCCACTGCCCATGATGTTATGTAA 990 49.7 MASPKLTAFVLVVALMLCTSHAQLNPFFYAFTCPQLPFVVKRIVSQALQTDDRVAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNALPNNGIQGIEIVDNIKAAVETACPGVVSCADILAIASQISVILSGGPAWVVLLGRRDSRIANRAAASNLPSPFETLDALKAKFAALGLDSTDLVTLSGAHTFGRSRCLFFTGRFDNFNSTGLPDPTLDPVYREQLRQACTTPVTRVSFDPITPDTFDKNYYINLKNHRGLLQSDQELFSTPGADTTAVVNTFAASQLVFFIQFGNSMIKMGNLSPPPGTPSEVRLTCGKLNSPTAHDVM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 625448 626664 - Hsped.08g00800.1 Hepe08g0080 576052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0080 329 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0080 329 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Hepe08g0080 329 Gene3D - 28 321 - -
Hepe08g0080 329 Pfam Peroxidase 40 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 FunFam Peroxidase 27 172 - -
Hepe08g0080 329 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Hepe08g0080 329 PANTHER PEROXIDASE 72-RELATED 11 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0080 329 Gene3D Peroxidase, domain 2 160 300 - -
Hepe08g0080 329 FunFam Peroxidase 160 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0077 Hepe-Chr8:610989 Hepe08g0080 Hepe-Chr8:625448 4.70e-116 dispersed
Hepe08g0080 Hepe-Chr8:625448 Hepe08g0082 Hepe-Chr8:648102 1.14e-94 dispersed
Hepe08g0079 Hepe-Chr8:621209 Hepe08g0080 Hepe-Chr8:625448 2.65e-171 tandem
Hepe08g0080 Hepe-Chr8:625448 Hepe08g0081 Hepe-Chr8:635614 3.68e-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0080 K00430 - csv:101211752 571.622