Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0082 ATGGAAAGCTCAAGCCGTAGATCATTAAAGGGACGTTTTGCTTTGCTTATGATCATTTTTTTGATTATGTGTGGTAACACAAGCTCGCAATTAACTGTGGATTTCTACAAGACTTCATGCCCAAGTCTTCTCAGAATTGTGAGGAGAGAAGTCCTGAATGCTATCAAGATTGAGACGCGGATGGCGGCTTCGCTCCTTCGCCTCCATTTTCACGACTGCTTCGTTAACGGTTGTGACGGATCGGTGCTTTTGGATGGAAATGATGGGGAGAAATTTGCACTTCCCAACATCAATTCTCTTAGAGGACTTGAAGTTGTGGACAGAATCAAAACAGCAGTGGAAAATTCTTGCTGTGGAGTTGTATCATGTGCTGATATATTAACCATAGCTGCCAGAGATTCTGTTGTCTTGAGTGGAGGACCAACATGGAGGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAGAACAGGAGCCAATCAGGGACTGCCCGCTCCATTTGAAAACATTGATGGTATCCTCAACAAGTTCACCACTGTTGGCCTTGATCTCACTGACGTCGTTGCTTTATCTGGAGCACATACAATTGGATTGGCGAGGTGTGCGATGTTCAATAATAGGCTGTTCAACTTCTCAGAAACTGGTTCTCCAGACCCGACCATGGAGAGCACAATGGTGTCTGATCTGCAATCTTTATGCCCACTAACCGACGACGGCAACAAGACCACAGTTCTCGACAGAAACTCTACCGATTTATTCGACAACCATTACTACAAGAATTTGCTCAACCAAAAAGGCCTCTTGGAATCCGACCAAATTCTCTTCTCAAGCGATGCAGCTCAAACCACCACAAAAACTTTGGTCGAAGCTTATAGCTCAAACACAACGCTTTTCTTCGCCGACTTTGTCAAAGCAATGATCAAGATGGGGAATATAGCCCCACTCACTGGCTCTAATGGACAGATCCGAAACAACTGCAGACTCGTTAATTAA 996 44.48 MESSSRRSLKGRFALLMIIFLIMCGNTSSQLTVDFYKTSCPSLLRIVRREVLNAIKIETRMAASLLRLHFHDCFVNGCDGSVLLDGNDGEKFALPNINSLRGLEVVDRIKTAVENSCCGVVSCADILTIAARDSVVLSGGPTWRVLLGRRDGLVANRTGANQGLPAPFENIDGILNKFTTVGLDLTDVVALSGAHTIGLARCAMFNNRLFNFSETGSPDPTMESTMVSDLQSLCPLTDDGNKTTVLDRNSTDLFDNHYYKNLLNQKGLLESDQILFSSDAAQTTTKTLVEAYSSNTTLFFADFVKAMIKMGNIAPLTGSNGQIRNNCRLVN 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 648102 650345 - Hsped.08g00820.1 Hepe08g0082 576054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0082 331 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 SUPERFAMILY Heme-dependent peroxidases 30 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 CDD secretory_peroxidase 30 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g0082 331 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Hepe08g0082 331 Gene3D Peroxidase, domain 2 165 310 - -
Hepe08g0082 331 Gene3D - 35 331 - -
Hepe08g0082 331 PANTHER PEROXIDASE 72-RELATED 15 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Hepe08g0082 331 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 Pfam Peroxidase 47 294 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g0082 331 FunFam Peroxidase 165 310 - -
Hepe08g0082 331 FunFam Peroxidase 34 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g0082 Hepe-Chr8:648102 4.09e-110 dispersed
Hepe06g1744 Hepe-Chr6:68520938 Hepe08g0082 Hepe-Chr8:648102 1.64e-92 dispersed
Hepe08g0080 Hepe-Chr8:625448 Hepe08g0082 Hepe-Chr8:648102 1.14e-94 dispersed
Hepe08g0082 Hepe-Chr8:648102 Hepe08g0687 Hepe-Chr8:6189940 9.56e-98 dispersed
Hepe08g0081 Hepe-Chr8:635614 Hepe08g0082 Hepe-Chr8:648102 8.51e-98 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0082 K00430 - csv:101211257 533.487