Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0109 | ATGGATTCGGCTCAGCCATCCCCACCACCACCAGAGCTCCTTCTTCACAATCTCAGAGCTCTCAAGGTACTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTCTCCGACGACTCTGCTAATTTCCCCTTCGCTCTCAAGGTCGTCCAGAAATCCTCTTTTCTTTCCAAGCTCGACGCCGAACGCCGAGCCCGTTGGGAGATTCAGGTTCTCTCTCGCTTGTCCCTCCCTAAACCCCCCCACCCCTTCCTCCCCGACATTATCGGTTCCTTCGACTCCGACGAGTTTTTGGGCTGGGCCGTTCCTTACTGTCCCGGCGGCGACCTCAACGTCTTGCGTTACCGTCAAATAGACCGGGTCTTCTCGCCTGCTGTCATTCGCTTCTATTTGGCCGAGATCGTCTGTGCGCTCGACCACCTACATACCATGGACATTGTCTACCGAGATTTGAAGCCCGAGAATGTATTGATTCAACAATCGGGTCACGTCACTCTCACGGATTTCGATTTGTCGCGTAATTTGACTCGCAGATTAACACCAAAAGACGTCGCTTCGCTTGATCATTCCGGCCACGACAAGCCGCCGGTCGTCGTTCGCCAAAAGCACCGCCGGAACTTGACGCGATGGCTCATGGCAACCTCCCATGTTAAAAACAGTTTAAAGAAGGCTAAATCGGCCCGGGTCAGCCCTGTGAGCCGTCGGAAGCCGAGTTTCACCAATGGCGAGAGGTCGAACTCGTTTGTCGGAACGGAGGAGTACGTTTCGCCGGAGGTTGTTCGCGGCGACGGACATGAATTCGCCGTCGACTGGTGGGCCTTGGGGATTCTCACGTACGAGATGCTTTACGGTAAGACGCCGTTTAAGGGGAAGAACCGGAAAGATACGTTTAGAAACGTTCTGGTCAAAGCGCCGGAGTTGATCGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTTAAGGACCCCACCAGGCGGTTGGGGTACGTACGGGGCGCGTGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGCGACCGCCATTTTTACCGACTCGTGAAGAAACGGAATGGACGGAGAATTTAACGCCCGGTTGTGGTGTGGGTATAGCGGAATACTTTCATAGACAGAGATCGCCGCCTTCGTTTCCACCGTCGCCGTCGTCGTCTCCGTCGACCTCCTTCGGTTGGCAGAATAACAACATGTCTTTAACGGAGTTCTGA | 1269 | 54.22 | MDSAQPSPPPPELLLHNLRALKVLGKGAMGTVFLVHDRLSDDSANFPFALKVVQKSSFLSKLDAERRARWEIQVLSRLSLPKPPHPFLPDIIGSFDSDEFLGWAVPYCPGGDLNVLRYRQIDRVFSPAVIRFYLAEIVCALDHLHTMDIVYRDLKPENVLIQQSGHVTLTDFDLSRNLTRRLTPKDVASLDHSGHDKPPVVVRQKHRRNLTRWLMATSHVKNSLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGKTPFKGKNRKDTFRNVLVKAPELIGKRSDLTDLIERLLVKDPTRRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPTREETEWTENLTPGCGVGIAEYFHRQRSPPSFPPSPSSSPSTSFGWQNNNMSLTEF | 422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 909973 | 911328 | - | Hsped.08g01090.1 | Hepe08g0109 | 576081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0109 | 422 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 111 | - | - | |
Hepe08g0109 | 422 | FunFam | Serine/threonine-protein kinase OXI1 | 112 | 180 | - | - | |
Hepe08g0109 | 422 | FunFam | Serine/threonine-protein kinase OXI1 | 246 | 367 | - | - | |
Hepe08g0109 | 422 | Pfam | Protein kinase domain | 21 | 183 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0109 | 422 | Pfam | Protein kinase domain | 243 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0109 | 422 | FunFam | Serine/threonine-protein kinase UCNL | 18 | 111 | - | - | |
Hepe08g0109 | 422 | ProSiteProfiles | Protein kinase domain profile. | 18 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0109 | 422 | MobiDBLite | consensus disorder prediction | 226 | 247 | - | - | |
Hepe08g0109 | 422 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 149 | 161 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g0109 | 422 | SMART | serkin_6 | 18 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g0109 | 422 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 51 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g0109 | 422 | MobiDBLite | consensus disorder prediction | 392 | 414 | - | - | |
Hepe08g0109 | 422 | Gene3D | Transferase(Phosphotransferase) domain 1 | 245 | 367 | - | - | |
Hepe08g0109 | 422 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 411 | IPR011009 | - | |
Hepe08g0109 | 422 | Gene3D | Phosphorylase Kinase; domain 1 | 368 | 377 | - | - | |
Hepe08g0109 | 422 | Gene3D | Transferase(Phosphotransferase) domain 1 | 112 | 180 | - | - | |
Hepe08g0109 | 422 | PANTHER | FLIPPASE KINASE 1-RELATED | 13 | 369 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1337 | Hepe-Chr3:69605927 | Hepe08g0109 | Hepe-Chr8:909973 | 7.13e-89 | dispersed | |
Hepe08g0109 | Hepe-Chr8:909973 | Hepe08g0238 | Hepe-Chr8:2139715 | 4.48e-70 | dispersed | |
Hepe08g0109 | Hepe-Chr8:909973 | Hepe08g0237 | Hepe-Chr8:2119701 | 7.16e-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73011 | PF00069 | Pkinase | 2.60E-28 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0109 | - | - | - | 0.0 |