Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0109 ATGGATTCGGCTCAGCCATCCCCACCACCACCAGAGCTCCTTCTTCACAATCTCAGAGCTCTCAAGGTACTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTCTCCGACGACTCTGCTAATTTCCCCTTCGCTCTCAAGGTCGTCCAGAAATCCTCTTTTCTTTCCAAGCTCGACGCCGAACGCCGAGCCCGTTGGGAGATTCAGGTTCTCTCTCGCTTGTCCCTCCCTAAACCCCCCCACCCCTTCCTCCCCGACATTATCGGTTCCTTCGACTCCGACGAGTTTTTGGGCTGGGCCGTTCCTTACTGTCCCGGCGGCGACCTCAACGTCTTGCGTTACCGTCAAATAGACCGGGTCTTCTCGCCTGCTGTCATTCGCTTCTATTTGGCCGAGATCGTCTGTGCGCTCGACCACCTACATACCATGGACATTGTCTACCGAGATTTGAAGCCCGAGAATGTATTGATTCAACAATCGGGTCACGTCACTCTCACGGATTTCGATTTGTCGCGTAATTTGACTCGCAGATTAACACCAAAAGACGTCGCTTCGCTTGATCATTCCGGCCACGACAAGCCGCCGGTCGTCGTTCGCCAAAAGCACCGCCGGAACTTGACGCGATGGCTCATGGCAACCTCCCATGTTAAAAACAGTTTAAAGAAGGCTAAATCGGCCCGGGTCAGCCCTGTGAGCCGTCGGAAGCCGAGTTTCACCAATGGCGAGAGGTCGAACTCGTTTGTCGGAACGGAGGAGTACGTTTCGCCGGAGGTTGTTCGCGGCGACGGACATGAATTCGCCGTCGACTGGTGGGCCTTGGGGATTCTCACGTACGAGATGCTTTACGGTAAGACGCCGTTTAAGGGGAAGAACCGGAAAGATACGTTTAGAAACGTTCTGGTCAAAGCGCCGGAGTTGATCGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTTAAGGACCCCACCAGGCGGTTGGGGTACGTACGGGGCGCGTGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGCGACCGCCATTTTTACCGACTCGTGAAGAAACGGAATGGACGGAGAATTTAACGCCCGGTTGTGGTGTGGGTATAGCGGAATACTTTCATAGACAGAGATCGCCGCCTTCGTTTCCACCGTCGCCGTCGTCGTCTCCGTCGACCTCCTTCGGTTGGCAGAATAACAACATGTCTTTAACGGAGTTCTGA 1269 54.22 MDSAQPSPPPPELLLHNLRALKVLGKGAMGTVFLVHDRLSDDSANFPFALKVVQKSSFLSKLDAERRARWEIQVLSRLSLPKPPHPFLPDIIGSFDSDEFLGWAVPYCPGGDLNVLRYRQIDRVFSPAVIRFYLAEIVCALDHLHTMDIVYRDLKPENVLIQQSGHVTLTDFDLSRNLTRRLTPKDVASLDHSGHDKPPVVVRQKHRRNLTRWLMATSHVKNSLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGKTPFKGKNRKDTFRNVLVKAPELIGKRSDLTDLIERLLVKDPTRRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPTREETEWTENLTPGCGVGIAEYFHRQRSPPSFPPSPSSSPSTSFGWQNNNMSLTEF 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 909973 911328 - Hsped.08g01090.1 Hepe08g0109 576081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0109 422 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Hepe08g0109 422 FunFam Serine/threonine-protein kinase OXI1 112 180 - -
Hepe08g0109 422 FunFam Serine/threonine-protein kinase OXI1 246 367 - -
Hepe08g0109 422 Pfam Protein kinase domain 21 183 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0109 422 Pfam Protein kinase domain 243 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0109 422 FunFam Serine/threonine-protein kinase UCNL 18 111 - -
Hepe08g0109 422 ProSiteProfiles Protein kinase domain profile. 18 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0109 422 MobiDBLite consensus disorder prediction 226 247 - -
Hepe08g0109 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0109 422 SMART serkin_6 18 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0109 422 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524(InterPro)
Hepe08g0109 422 MobiDBLite consensus disorder prediction 392 414 - -
Hepe08g0109 422 Gene3D Transferase(Phosphotransferase) domain 1 245 367 - -
Hepe08g0109 422 SUPERFAMILY Protein kinase-like (PK-like) 15 411 IPR011009 -
Hepe08g0109 422 Gene3D Phosphorylase Kinase; domain 1 368 377 - -
Hepe08g0109 422 Gene3D Transferase(Phosphotransferase) domain 1 112 180 - -
Hepe08g0109 422 PANTHER FLIPPASE KINASE 1-RELATED 13 369 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1337 Hepe-Chr3:69605927 Hepe08g0109 Hepe-Chr8:909973 7.13e-89 dispersed
Hepe08g0109 Hepe-Chr8:909973 Hepe08g0238 Hepe-Chr8:2139715 4.48e-70 dispersed
Hepe08g0109 Hepe-Chr8:909973 Hepe08g0237 Hepe-Chr8:2119701 7.16e-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73011 PF00069 Pkinase 2.60E-28 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0109 - - - 0.0