Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0110 | ATGAATTCAAACAATTGGCTTTCATTTCCACTTTCACCCACTAATCCTTCCTTACCACCCCATCTCCAAACAACAACTCAATCCCATCATCATTTCTCTTTGGGTAATTTGGAGAATGATCATAATATGGATATCCCATTTCAAACCCACGAGTGGAATCTGATAAGTAATAGTCAAGGAGGTGGTGAAGTTCCAAAAGTGGCAGATTTTTTAGGCGTAAGCAAGGCAGAAAATGAAACAGATCTAATTGGGTTTAATAATGAAATTCATCATCAGAGTAATGATACAGACTACTTGTTTCCAATCACAAGATTGGTACCTGTTCAACAAACAACAGTTGCTGCTGCTAATATAAATCTCGACTCTACCAATACTAACTATGACCTTCAAGATAATTCAAACAGTTTGCAGTCTTTGACACTTTCAATGGCCACTACTGGTAATGGCAAGGCCTCTGCATGTGAAACCCCCCCTGACAATAACAATACCGCCATTACCACGGTTGACGTCACGCCTAGAAGAACTCTCGACACTTTTGGCCAAAGAACTTCTATTTATCGCGGTGTCACCAGGCATAGATGGACGGGTAGGTATGAAGCACATTTGTGGGATAATAGTTGCAGGAGGGAAGGGCAGTCGAGGAAGGGTCGGCAAGGTGGGTATGATAAAGAAGAGAAAGCAGCTAGGGCTTATGATCTTGCTGCATTGAAGTACTGGGGAACATCCACTACTACAAACTTTCCTATTAGTAACTACGAGAAGGAAGTGGAGGAAATGAAGCACATGACGAGACAAGAATTTGTTGCTTCCATTAGAAGGAAAAGTAGTGGATTTTCAAGGGGGGCATCCATGTACCGTGGTGTTACAAGGTTTGATTCATATGTGAGTCTTATATTTGTTATAGGCACGGAGGAGGAAGCAGCAGAAGCATACGACATAGCGGCGATAAAATTCCGAGGGCTAAACGCAGTGACAAATTTCGACATGAGCCGTTACGATGTGAAAAGCATATTAGAGAGCAACACGCTCCCGATCGGCGGTGGTGCTGCAAAGCGGCTGAAAGAAGCCCAAGCCATTGAGTCGTCTCGAAAGCGCGAGGAAATGATTGCCCTAGGTTCCTCCTCCTCCTCCTCCTCCTTCCAATATGGCAACTCCTCCTCCTCCTCTACTAATTCCAACAGGCTAATTCCCAATTTCCCTCCCTTACTCGACCACCACCTCCAAACCCAGCCTCTGCTCTCTCTTCAAAACCACCCTGACATTTCTCACTATACCCACGACCCCCCCTCGTTTCATCACTCTAACTACATGCACACCCACCTCCAACTTCACCAATCTGATTCCCCTTATGCCAACAACCATCAATTCTACGGTGCCGGTGCCGGTGTCGGTGGGTATCTTCACAACCATCCAGCTTTACTGCATGGGATGATCAACATGGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTCTAATTTGGAGAGTAACAACAACAACAATGCCACTAATTTTAACAATAGTAATAGTAATGGAGGGTATCTTGGAAATGCTTTTGGGGGGATGGGTTCTAGCAGCTCCGGCGCCCCGGCGGCGGAGGAATACGCCCTGGTTAAGGTTGATTATGACTCTGCTGCCTACGGGACCTGGTCCGGGGATTCGGTTCACCCCGCTTCTAACAATGGGGTTTTTTCAATGTGGAATGATATTAATTAA | 1716 | 46.1 | MNSNNWLSFPLSPTNPSLPPHLQTTTQSHHHFSLGNLENDHNMDIPFQTHEWNLISNSQGGGEVPKVADFLGVSKAENETDLIGFNNEIHHQSNDTDYLFPITRLVPVQQTTVAAANINLDSTNTNYDLQDNSNSLQSLTLSMATTGNGKASACETPPDNNNTAITTVDVTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRFDSYVSLIFVIGTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSSSSSSSFQYGNSSSSSTNSNRLIPNFPPLLDHHLQTQPLLSLQNHPDISHYTHDPPSFHHSNYMHTHLQLHQSDSPYANNHQFYGAGAGVGGYLHNHPALLHGMINMGGGGGGGGGGGSNLESNNNNNATNFNNSNSNGGYLGNAFGGMGSSSSGAPAAEEYALVKVDYDSAAYGTWSGDSVHPASNNGVFSMWNDIN | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 926720 | 930028 | - | Hsped.08g01100.1 | Hepe08g0110 | 576082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0110 | 571 | Gene3D | AP2/ERF domain | 256 | 330 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | Gene3D | AP2/ERF domain | 185 | 250 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 137 | 389 | - | - | |
Hepe08g0110 | 571 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Hepe08g0110 | 571 | SUPERFAMILY | DNA-binding domain | 184 | 250 | IPR016177 | GO:0003677(InterPro) | |
Hepe08g0110 | 571 | SMART | rav1_2 | 185 | 254 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | SMART | rav1_2 | 284 | 334 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 184 | 250 | - | - | |
Hepe08g0110 | 571 | SUPERFAMILY | DNA-binding domain | 283 | 330 | IPR016177 | GO:0003677(InterPro) | |
Hepe08g0110 | 571 | MobiDBLite | consensus disorder prediction | 364 | 395 | - | - | |
Hepe08g0110 | 571 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Hepe08g0110 | 571 | MobiDBLite | consensus disorder prediction | 368 | 395 | - | - | |
Hepe08g0110 | 571 | CDD | AP2 | 184 | 250 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | ProSiteProfiles | AP2/ERF domain profile. | 185 | 248 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | PRINTS | Ethylene responsive element binding protein signature | 310 | 330 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | PRINTS | Ethylene responsive element binding protein signature | 186 | 197 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0110 | 571 | ProSiteProfiles | AP2/ERF domain profile. | 252 | 328 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0110 | Hepe-Chr8:926720 | Hepe09g0476 | Hepe-Chr9:4398524 | 1.34e-85 | dispersed | |
Hepe08g0110 | Hepe-Chr8:926720 | Hepe08g1835 | Hepe-Chr8:45654109 | 1.52e-98 | transposed | |
Hepe08g0110 | Hepe-Chr8:926720 | Hepe08g1924 | Hepe-Chr8:51016520 | 1.52e-98 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56075 | PF00847 | AP2 | 2.70E-09 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0110 | K09285 | - | csv:101207097 | 747.273 |