Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0118 ATGGAGTTGGAGAGTTTGGAGAGGGATTTAGAGGAGATGAGAGATTATTACAAGAGTGGAAAAACAAAGGAAGCATCTTGGAGGATTTCTCAGCTCAAAGCCATTCGCCAACTTCTAAACCACAATGAACAACTCATTTACACTGCCCTTATGCAAGATTTGGCTAAACCCCATGTTGAAGCTTTCAGAGATGAGATTGGTACTCTCCAAAAGTCCCTCAACTTTGCTTTGCAAAATTTGAAACATTGGATGTCACCCAAAAAGGCAAAATTGCCAGCAATAGCTATGCTAAGTTCGGCAGAAGTGGTTCCACAGCCTTTGGGAGTTGTTCTTGTAATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTAGAGCCGTTGATAGGAGCAATAGCAGCCGGAAATTGCGTGGTTCTGAAGATGTCGGAGTTTTCTCCGGCGAGTTCAGCTTTTCTGGCCAAAGCCATCGGAAAATATGTTGATAATAAAGCAGTGAGAGTCGTTGAAGGAGGGCCGGCGGCCGGCGAGCGGCTGCTGCAGCAGCGGTGGGAGAAGATTTTCTTTACAGGAAGTGAACGAGTGGGGCGGATTGTTATGGCGGCCGCCGTGAAACACTTGACGCCGGTGATTTTGGAGCTCGGTGGGAAGTGTCCCGCCATTGTTGACTCCCATTCACTTTCCTTTTTATGGGATATTGAGTTTACTGCCAAACGGATCGTGGTCGGAAAATTTGGAGCCTGCGGCGGTCAAGCTTGCATAGCAATCGATTATGTCCTCATTGAACATAGATTTATATCCACCTTGGTCGAATTGGTGAAGAAGTTCATCAAGGAACTCTTCGATAAAAATTCGAACCAAGAAAAAAGCATGGCGAGGATCGTAAACAAACAAAGTTTCTTGAGATTGAAGAATCTGGTGGATGAACCTGCTGCCCGAGCTTCGATCATCTATGGAGGATCCATGGACGATGACAAACTGTTTATTGAGCCGACCATTCTGTTGAATCCACCAATCGATGCAGAAATTATGAGAGATGAAATCTTTGGACCATTACTTCCCATAATTGGACTGGACAAGATTGAAGACAGTATAGATTTCATCAATTCAAGGCCTAAGCCTCTTGCCATTTATGCCTTCACCAAAGATAAAGCTTTCCAAAGAAGACTCGTCTCAGAAACTTCATCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGCCGATACACTCCCATTTGGAGGGGTTGGTGAAAGTGGGATTGGGAGGTACCATGGAAAATTCTCATTCGACACCTTTAGTCATGAAAAGGCAATTCTGAAGATGAACTTCTTGGTGGACATCTGGTTCAGATATCCGCCATGGAACAATCACAAGCTTCAGCTGCTTAGACAAGCTTACAATCTTAACTATTTCCAGTTTGTCCTCACTGTTTTAGGTCTGAAAAAGTCTTAA 1458 44.1 MELESLERDLEEMRDYYKSGKTKEASWRISQLKAIRQLLNHNEQLIYTALMQDLAKPHVEAFRDEIGTLQKSLNFALQNLKHWMSPKKAKLPAIAMLSSAEVVPQPLGVVLVISSWNFPFGLSLEPLIGAIAAGNCVVLKMSEFSPASSAFLAKAIGKYVDNKAVRVVEGGPAAGERLLQQRWEKIFFTGSERVGRIVMAAAVKHLTPVILELGGKCPAIVDSHSLSFLWDIEFTAKRIVVGKFGACGGQACIAIDYVLIEHRFISTLVELVKKFIKELFDKNSNQEKSMARIVNKQSFLRLKNLVDEPAARASIIYGGSMDDDKLFIEPTILLNPPIDAEIMRDEIFGPLLPIIGLDKIEDSIDFINSRPKPLAIYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAADTLPFGGVGESGIGRYHGKFSFDTFSHEKAILKMNFLVDIWFRYPPWNNHKLQLLRQAYNLNYFQFVLTVLGLKKS 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 997473 1003358 - Hsped.08g01180.1 Hepe08g0118 576090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0118 485 SUPERFAMILY ALDH-like 10 458 IPR016161 GO:0016491(InterPro)
Hepe08g0118 485 Coils Coil 3 23 - -
Hepe08g0118 485 FunFam Aldehyde dehydrogenase 14 218 - -
Hepe08g0118 485 PIRSF ALDH 1 479 IPR012394 GO:0006081(InterPro)
Hepe08g0118 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 14 438 IPR016162 GO:0016491(InterPro)
Hepe08g0118 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 215 420 IPR016163 GO:0016620(InterPro)
Hepe08g0118 485 FunFam Aldehyde dehydrogenase 215 420 - -
Hepe08g0118 485 Pfam Aldehyde dehydrogenase family 10 439 IPR015590 GO:0016491(InterPro)
Hepe08g0118 485 PANTHER ALDEHYDE DEHYDROGENASE 5 482 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0686 Hepe-Chr7:8067223 Hepe08g0118 Hepe-Chr8:997473 3.55e-197 dispersed
Hepe08g0118 Hepe-Chr8:997473 Hepe08g0653 Hepe-Chr8:5813364 1.02e-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0118 K00128 - csv:101205263 816.994