Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0122 ATGGCCTCACTGGCGCTTACTTCCTCGTATCTCCCTTCTCTCAGGTCGCGCCTTCCGAAATCGGAATCAAATGCTCAAACCCGCTGCTCCTCTCTCCGTTCGAGTCTTCCCAAAGCCGCCATTTTCGGTAGCGGCGTCAGAACTAGCTTCCGCATTCCGTCTTCTCTATGCAATGAAGCTAAATTCGTTAAACCAGCTCTAGATTTCAGAAGCTCTCGTGGAAATCTAGGTGGCTTTACTGTCCGAGCGGCTTCCACTTCTTCCGCTGCTGTAACTCCGGCTCCGGCTCCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCGATTGCTACAGGTATCATTCTATGGTTTGTTCCGGTGCCGTCTGGTGTTTCTCGGAACGCTTGGCAATTGCTCGCGATTTTCCTTGCTACGATTGTTGGGATTATTACTCAGCCTTTGCCTCTTGGTGCTGTTGCTTTGCTTGGACTTGGCGCCTCCGTTCTTACTAAAACCCTAACCTTCGCTGCTGCATTCTCTGCGTTTGGTGATCCTATTCCATGGCTCATCGCTCTCGCCTTCTTCTTCGCACGAGGGTTCATTAAGACTGGACTTGGTAATCGAATTGCTTATCAGTTTGTTTCTCTATTTGGTAGCTCATCGTTAGGGTTAGGTTACAGTTTAGTATTCAGTGAGGCCTTGTTGGCGCCGGCTATTCCTTCGGTGTCGGCGAGAGCAGGAGGGATATTCCTTCCACTGGTGAAATCGCTCTGTGTTGCTTGCGGTAGCAATGTTGGTGATGGGACGGAAAGACGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCAGTGATTTCATCGTCCATGTTCTTGACGGCCATGGCTGCCAATCCTCTGAGTGCGACTCTGACGTTTAACACCATTCAGCAGACGATTGGATGGACCGATTGGGCTAAAGCAGCGATTGTTCCAGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTGGTCTATCCGCCCACGGTGAAGAGCAGTCCAGACGCACCAAAGCTTGCGAGAGAGAAGTTAGAAAAGATGGGACCGATGACCAAGAATGAGATCATTATGGCCGGAACTCTGCTTCTCACGGTGGGTCTTTGGATTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGATTGTCCGTCCTTCTTGTGACTGGGGTTGTGACATGGAAAGAGTGCTTGGCAGAATCTGTTGCCTGGGACACTCTAACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTAGGCCTTTCATGGCAGCTGTCGTTCGGCATTCTGGTTCTTCTCTATTTCTACTCTCACTACTTCTTTGCAAGTGGAGCTGCTCACATAGGCGCGATGTTTACAGCCTTCTTATCTGTTGCTAGTGCTTTGGGGACACCCCCTTACTTTGGAGCCATAGTACTTGCCTTCTTATCTAATCTGATGGGTGGCCTAACCCATTACGGCATTGGTTCAGCGCCTGTTTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCGTATCGGTTGTCAACATCATTATCTGGCTCGGTGTCGGGGGAGTTTGGTGGAAGTTCATTGGTTTATGGTGA 1713 49.5 MASLALTSSYLPSLRSRLPKSESNAQTRCSSLRSSLPKAAIFGSGVRTSFRIPSSLCNEAKFVKPALDFRSSRGNLGGFTVRAASTSSAAVTPAPAPQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFAAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTERRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTFNTIQQTIGWTDWAKAAIVPGLISLIVVPLLLYVVYPPTVKSSPDAPKLAREKLEKMGPMTKNEIIMAGTLLLTVGLWIFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLAFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSVVNIIIWLGVGGVWWKFIGLW 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1045533 1050928 + Hsped.08g01220.1 Hepe08g0122 576094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0122 570 CDD ArsB_NhaD_permease 142 564 - -
Hepe08g0122 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 38 570 IPR030676 GO:0005215(PANTHER)
Hepe08g0122 570 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe08g0122 570 NCBIfam DASS family sodium-coupled anion symporter 122 564 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0347 Hepe-Chr7:3524599 Hepe08g0122 Hepe-Chr8:1045533 2.40e-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0122 - - - 0.0