Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0129 | GGCTTCCGATTTCCACAATTTGCTCTCCAAGTATGCAGTCAAAGTCTAAAAGTGTGAGTGAACTAGAATCTGAACCACCAAATATGCAGCAGCCTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACACTCTTATCTCCCCACCAGCAGCAGGAGGAAATGTGTCCAATTCAGCATCACTGGAATGCGCTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTGGATGAAGATGATGATGGTGAGATCACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCACAACAGTCAGCATGCTGTTTCTACTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCCTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCTATGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCTCTTGAGGTAACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTACTGGAGGACGTTTTGCCAAGAAAAATGAAGTTAAATCTTCAAGCTCTACTAGGAAGGACAAGAAATCCGGTTCTGGTCAAGCTATCTCGTCGCAGTCTGCTAGTTCATCTGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGACTTCCTCCAATGGTCAACAAGAAGCTAGGACCCAGCTGAATGAGGCATATGAAGCTCGTTGTTATGTGAATGGCAGTAGCCATTTTCATAATTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGCCCTGGTGATAGAGGTGAAGATGGAGACTGTTCGGTACAGCAACGAGGAAGTATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGA | 1067 | 45.55 | LPISTICSPSMQSKSKSVSELESEPPNMQQPSSYSEPWWRSIGYTLISPPAAGGNVSNSASLECANGASESNDGQSMSNDDLDEDDDGEITKDSQAASYGQGQHNSQHAVSTAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEVKSSSSTRKDKKSGSGQAISSQSASSSGSEAVPGALAETWTSSNGQQEARTQLNEAYEARCYVNGSSHFHNYSSFQASSYALRPGDRGEDGDCSVQQRGSISENQAAQRRLAIK | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1100717 | 1105994 | + | Hsped.08g01290.1 | Hepe08g0129 | 576101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 216 | 232 | - | - | |
Hepe08g0129 | 354 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 183 | 203 | IPR018362 | GO:0003677(InterPro)|GO:0016602(InterPro) | |
Hepe08g0129 | 354 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 29 | 292 | IPR001289 | GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 250 | 289 | - | - | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 233 | 249 | - | - | |
Hepe08g0129 | 354 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 180 | 235 | IPR001289 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0129 | 354 | ProSiteProfiles | NF-YA/HAP2 family profile. | 178 | 238 | IPR001289 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 50 | 111 | - | - | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 94 | 111 | - | - | |
Hepe08g0129 | 354 | SMART | cbf3 | 177 | 238 | IPR001289 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 51 | 76 | - | - | |
Hepe08g0129 | 354 | PRINTS | CCAAT-binding transcription factor subunit B signature | 212 | 235 | IPR001289 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0129 | 354 | PRINTS | CCAAT-binding transcription factor subunit B signature | 181 | 203 | IPR001289 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0129 | 354 | Gene3D | - | 178 | 240 | - | - | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 321 | 354 | - | - | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 214 | 289 | - | - | |
Hepe08g0129 | 354 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0452 | Hepe-Chr5:5925321 | Hepe08g0129 | Hepe-Chr8:1100717 | 1.41e-23 | dispersed | |
Hepe08g0129 | Hepe-Chr8:1100717 | Hepe08g2684 | Hepe-Chr8:68857174 | 6.09e-26 | dispersed | |
Hepe04g2048 | Hepe-Chr4:75341307 | Hepe08g0129 | Hepe-Chr8:1100717 | 1.38e-33 | transposed | |
Hepe03g1747 | Hepe-Chr3:74366405 | Hepe08g0129 | Hepe-Chr8:1100717 | 7.33e-52 | wgd | |
Hepe08g0129 | Hepe-Chr8:1100717 | Hepe09g1122 | Hepe-Chr9:12757075 | 9.49e-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56079 | PF02045 | CBFB_NFYA | 2.50E-26 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0129 | K08064 | - | csv:101212961 | 554.673 |