Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0175 ATGGAACAGAGAAAGTACAGAGCCGATCTTCTTCTCCTCCTCTTTTTCCTCTCCTTTTCCGGCCGATCCGTCGCCGTTCACGCCTACCAGAACTACACCGTCGGCGATTCCCTCGGCTGGTTCGACAATTTGGAGAAACCTACCGTCGATTACCAAAATTGGACCGTCGGCAAGAACTTCAACCTCGGCGATTTTCTAATTTTTAATACGGACACCAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTCTGCGACTACGACGACGCATCAGAAAAGGACACGACGGAATGGTCCGCCGCCGATCCGTCGGCGATCGCTCCGTACGCCGTAACGATGGCGGTCCCACTGATGAAAGAAGGGATCAATTACTTCTTCTCCGGCCACTACGACGGAGAGCAGTGCCAAAATGGGCAACAATTCAAAATCAACGTCACTCATGGCGAGGGCCTGCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCGGCAATTCCCGACTCCGGCGACCAAACCGAATCTGCACCCGATACCATCGTCCCTTCCAGCTTCGACAATCCCCGAAACGACGTCGCTGACAGCGACGAAAAGGAAGCTTCAGGCTCCGTTTCGTTATCGCTTCACTTCAAATTTTATGAGCTTTTCTTCTTGTTGGTTGGTATTGGCTGCATGTTTCTTTTTACTGGGTGA 705 51.49 MEQRKYRADLLLLLFFLSFSGRSVAVHAYQNYTVGDSLGWFDNLEKPTVDYQNWTVGKNFNLGDFLIFNTDTNHSVVQTYNFTTYKLCDYDDASEKDTTEWSAADPSAIAPYAVTMAVPLMKEGINYFFSGHYDGEQCQNGQQFKINVTHGEGLPKSMRDSSDEAPAPAIPDSGDQTESAPDTIVPSSFDNPRNDVADSDEKEASGSVSLSLHFKFYELFFLLVGIGCMFLFTG 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1534247 1537446 - Hsped.08g01750.1 Hepe08g0175 576147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0175 234 Gene3D - 29 153 IPR008972 -
Hepe08g0175 234 Pfam Plastocyanin-like domain 40 142 IPR003245 GO:0009055(InterPro)
Hepe08g0175 234 FunFam Early nodulin-like protein 18 29 151 - -
Hepe08g0175 234 MobiDBLite consensus disorder prediction 152 200 - -
Hepe08g0175 234 SUPERFAMILY Cupredoxins 31 148 IPR008972 -
Hepe08g0175 234 PANTHER BLUE COPPER PROTEIN 16 163 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Hepe08g0175 234 MobiDBLite consensus disorder prediction 176 193 - -
Hepe08g0175 234 ProSiteProfiles Phytocyanin domain profile. 30 150 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0470 Hepe-Chr3:7180291 Hepe08g0175 Hepe-Chr8:1534247 2.01e-30 dispersed
Hepe08g0175 Hepe-Chr8:1534247 Hepe03g1624 Hepe-Chr3:73141401 1.08e-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0175 - - - 0.0