Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0175 | ATGGAACAGAGAAAGTACAGAGCCGATCTTCTTCTCCTCCTCTTTTTCCTCTCCTTTTCCGGCCGATCCGTCGCCGTTCACGCCTACCAGAACTACACCGTCGGCGATTCCCTCGGCTGGTTCGACAATTTGGAGAAACCTACCGTCGATTACCAAAATTGGACCGTCGGCAAGAACTTCAACCTCGGCGATTTTCTAATTTTTAATACGGACACCAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTCTGCGACTACGACGACGCATCAGAAAAGGACACGACGGAATGGTCCGCCGCCGATCCGTCGGCGATCGCTCCGTACGCCGTAACGATGGCGGTCCCACTGATGAAAGAAGGGATCAATTACTTCTTCTCCGGCCACTACGACGGAGAGCAGTGCCAAAATGGGCAACAATTCAAAATCAACGTCACTCATGGCGAGGGCCTGCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCGGCAATTCCCGACTCCGGCGACCAAACCGAATCTGCACCCGATACCATCGTCCCTTCCAGCTTCGACAATCCCCGAAACGACGTCGCTGACAGCGACGAAAAGGAAGCTTCAGGCTCCGTTTCGTTATCGCTTCACTTCAAATTTTATGAGCTTTTCTTCTTGTTGGTTGGTATTGGCTGCATGTTTCTTTTTACTGGGTGA | 705 | 51.49 | MEQRKYRADLLLLLFFLSFSGRSVAVHAYQNYTVGDSLGWFDNLEKPTVDYQNWTVGKNFNLGDFLIFNTDTNHSVVQTYNFTTYKLCDYDDASEKDTTEWSAADPSAIAPYAVTMAVPLMKEGINYFFSGHYDGEQCQNGQQFKINVTHGEGLPKSMRDSSDEAPAPAIPDSGDQTESAPDTIVPSSFDNPRNDVADSDEKEASGSVSLSLHFKFYELFFLLVGIGCMFLFTG | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1534247 | 1537446 | - | Hsped.08g01750.1 | Hepe08g0175 | 576147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0175 | 234 | Gene3D | - | 29 | 153 | IPR008972 | - | |
Hepe08g0175 | 234 | Pfam | Plastocyanin-like domain | 40 | 142 | IPR003245 | GO:0009055(InterPro) | |
Hepe08g0175 | 234 | FunFam | Early nodulin-like protein 18 | 29 | 151 | - | - | |
Hepe08g0175 | 234 | MobiDBLite | consensus disorder prediction | 152 | 200 | - | - | |
Hepe08g0175 | 234 | SUPERFAMILY | Cupredoxins | 31 | 148 | IPR008972 | - | |
Hepe08g0175 | 234 | PANTHER | BLUE COPPER PROTEIN | 16 | 163 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Hepe08g0175 | 234 | MobiDBLite | consensus disorder prediction | 176 | 193 | - | - | |
Hepe08g0175 | 234 | ProSiteProfiles | Phytocyanin domain profile. | 30 | 150 | IPR003245 | GO:0009055(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0470 | Hepe-Chr3:7180291 | Hepe08g0175 | Hepe-Chr8:1534247 | 2.01e-30 | dispersed | |
Hepe08g0175 | Hepe-Chr8:1534247 | Hepe03g1624 | Hepe-Chr3:73141401 | 1.08e-11 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0175 | - | - | - | 0.0 |