Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0185 ATGGCGGATATTAGAAAATGGTTCATGAAAGCACACGATAAAGACAATGGCAGTGCGTCGAAGAATGCAAAGCCTGCTCCAAGCAATGTAGACAAATCCGCTTCTGCTGAGCTACAGACCGGAAAAACAGGGCTGACTGGTGGGGAAAGTACTGGCAGAAGGATAACTAGCAAGTATTTTGCCTCAGAAAAGCAGAAGTCTAAGGATACAAAAGAAACAGAAGAACTCCCGATCAAACGAAAGTCTCCACAGGATGCCAAGGAATCACCAGCCAAAAGAAAGTTTCAAAAGGACAGTGAGGAATCACTGAAAACTCCCCCTTTAAAAAAATCAAACAAAATTGATGACAATGACAATGATGCTGTTTTTTCTAGTTCTAGAAAGAACTTGTCTGATATCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAACCTGTAGAAATTGAAGAGAGTGACGATGAGGAAACTAAAGGCACCGAGTCTTCTCTGAAGCCTAGTGGAAGGGGAAAGGGGGGAAGAGGTTCATCTGCTGCAACTGTTGGTGGTAGAGGCAGAGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCCGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCACGGTGGTCGAATAACTGGATCTATCAGCAAAAAAACAAACTATCTACTATGCGATGAAGATATTGGTGGCCGAAAATCTGCCAAAGCGAAAGAGCTGGGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACAAGATCCGTGCATCAGGCACAAAAGCTCCTCCAAGGATAGATACTAAAAAATCTGTGGTTAAGTCAGTGGAATCTCCGACAGAGAAAAAATCCCAGAAAGTACAAGCAAAGACGCGCAAAGATTTGACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGCCGAACAGTTAATCTTTCTTCCCTAACATGGACAGAAAAATATAAGCCAAAGGCTCCAAATGACATTATAGGGAATCAGTCACTGGTGAAACAACTTCACGATTGGTTGGCACATTGGAATGAGAACTTCTTAGATGGTGGAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCTGGGGCCAAAAAAGCTGTCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTTAGCCAGATGCTTGGTTATGAGGCTATAGAGGTAAATGCCAGTGACAATCGGGGTAAATCAGATGCAAAAATTCAAAAGGGAATCGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCTTTGCATTTCAGAATGGACCAGCGAAAACATCACAAAACTGTGTTGATTATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGTGAGCATTAAAAGCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGCTACAGCCAGAAGCTGAAAAGCCTGGTGAACTATTGTCTGATTCTCAGCTATAGGAAACCTACAAAACAACAGATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCACTACCTGAGTCTGTCAATGTCAGTAATTAAATATGATGATATTCGCCAACGGCTTCTGAGCAGTAAGAAAGATGAAGACATCTCACCATTCACCGCTGTTGATAAGTTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATAGACCTCAGCATGAGTGATCTTGACCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGCTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGAATCGATTGCTCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTCTCTCAAAGTAGTTGTATTGCTTCTTGTGTAATCCCAGCTTCATTATTGCATGGGCAAAGAGAAACGCTTGAGCAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCAACATTTGGAAAAAATATGAGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGTGAGTCCTGTTCAGGGAGGCAACACCTACGAGTTGAGAACCTTACTCTATTTCTAAAGAGGTTGACTGAGCCACTGCACACGCTGCCTAAGGATGAAGCTGTTAAAATGGTTGTAGAATTTATGAGTCTATATTCTATCAGTCAGGAGGATTTTGATACTGTTTTGGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCATTGGATGGCGTGGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATACAAAGAAGTATGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCAAAGAAGCGAATTGCAGCGATTCTAGAACCGAATGAGGATACAGTTGAGGGTGCTGGTGGAGACAGGTTGGCAGAAAGTGACGATGAGGACTCTTTGGACAACGAGGGCGCAGAAGACTCCACAAACAGTGAGAAGCTGAAATTGGAACTTCAAAGCTTGAATAAGAAAGGAATGCAAGTGCAGTTGGATTTGAAGGGCGTGGAAAATTCAAGCGCCAAGAAATCCGGTGGTGGTGGCAGAGGAAGAGGAAGAGGAAGAGGTGGTTCCCAGGCTTCGGAGAAGAAAGGTGGGCGAGGTTCAGGATCTGCCACGAAGAGGAAAAGATGA 2931 42.89 MADIRKWFMKAHDKDNGSASKNAKPAPSNVDKSASAELQTGKTGLTGGESTGRRITSKYFASEKQKSKDTKETEELPIKRKSPQDAKESPAKRKFQKDSEESLKTPPLKKSNKIDDNDNDAVFSSSRKNLSDITPNKKLKSGSGKGITQKPVEIEESDDEETKGTESSLKPSGRGKGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSAKAKELGTAFLTEDGLFDKIRASGTKAPPRIDTKKSVVKSVESPTEKKSQKVQAKTRKDLTAGASPAKQKSRTVNLSSLTWTEKYKPKAPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFRMDQRKHHKTVLIMDEVDGMSAGDRGGVADLIVSIKSSKIPIICICNDRYSQKLKSLVNYCLILSYRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLHYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSSVSKDDNGIKRMESIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCVIPASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENLTLFLKRLTEPLHTLPKDEAVKMVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEVCKTHMVRAADLITLPGMKKAPKKRIAAILEPNEDTVEGAGGDRLAESDDEDSLDNEGAEDSTNSEKLKLELQSLNKKGMQVQLDLKGVENSSAKKSGGGGRGRGRGRGGSQASEKKGGRGSGSATKRKR 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1635132 1648880 - Hsped.08g01850.1 Hepe08g0185 576157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0185 976 MobiDBLite consensus disorder prediction 202 217 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 59 122 - -
Hepe08g0185 976 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 77 938 - GO:0003677(PANTHER)|GO:0005634(PANTHER)
Hepe08g0185 976 SMART BRCT_7 220 298 IPR001357 -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 307 330 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 1 19 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 877 893 - -
Hepe08g0185 976 Pfam Replication factor RFC1 C terminal domain 683 845 IPR013725 GO:0003689(InterPro)|GO:0005524(InterPro)|GO:0005663(InterPro)|GO:0006260(InterPro)
Hepe08g0185 976 Gene3D BRCT domain 195 297 IPR036420 -
Hepe08g0185 976 FunFam Replication factor C subunit 1 543 614 - -
Hepe08g0185 976 ProSiteProfiles BRCT domain profile. 218 296 IPR001357 -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 877 976 - -
Hepe08g0185 976 SUPERFAMILY BRCT domain 218 296 IPR036420 -
Hepe08g0185 976 FunFam Replication factor C subunit 1 354 542 - -
Hepe08g0185 976 Gene3D - 354 542 IPR027417 -
Hepe08g0185 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 603 IPR027417 -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 298 346 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 21 58 - -
Hepe08g0185 976 CDD HLD_clamp_RFC 543 601 IPR047854 -
Hepe08g0185 976 FunFam Replication factor C subunit 1 194 297 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 123 143 - -
Hepe08g0185 976 Pfam BRCA1 C Terminus (BRCT) domain 220 293 IPR001357 -
Hepe08g0185 976 CDD BRCT_RFC1 218 296 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 922 936 - -
Hepe08g0185 976 CDD AAA 403 536 - -
Hepe08g0185 976 PIRSF RFC1 1 945 IPR012178 GO:0003689(InterPro)|GO:0005524(InterPro)|GO:0005663(InterPro)|GO:0006260(InterPro)|GO:0006281(InterPro)
Hepe08g0185 976 Gene3D - 615 725 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 1 219 - -
Hepe08g0185 976 FunFam Replication factor C subunit 1 615 724 - -
Hepe08g0185 976 Gene3D - 543 613 - -
Hepe08g0185 976 MobiDBLite consensus disorder prediction 151 167 - -
Hepe08g0185 976 SMART AAA_5 406 544 IPR003593 GO:0016887(InterPro)
Hepe08g0185 976 Pfam ATPase family associated with various cellular activities (AAA) 410 522 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe08g0185 976 SUPERFAMILY post-AAA+ oligomerization domain-like 614 759 IPR008921 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1742 Hepe-Chr5:67721009 Hepe08g0185 Hepe-Chr8:1635132 1.13e-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0185 K10754 - csv:101204361 1636.31