Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0190 ATGTCATCAAGTTTGGGAGGGGCGTCAATTTCGCAAACAGATGATTTCGAGACGTTGACTCCAACTACTGATGTTGACCCTCTAAAGAGGGCCTGGCGTAATGAAAAGGCTGCCCCTGAGATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGCTTCAGTTAATGGAAGATACTATAGAGGAATATTCAAGCAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTATTGAGATCATATATTAGGATTCGCTTGCAGAAGATCGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGCCGTCTTTCTGAAGAAGAGAGAACATTTACTGATAGGTGTTGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCTAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGATACATTTGTGGTCTGCAAAAGTAGGGAATATCTGGAACATATACAGCTTGAGGATGAAGAAGAGAGGGCATCTAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCCATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAG 690 40.0 MSSSLGGASISQTDDFETLTPTTDVDPLKRAWRNEKAAPEILPFEASLVGRIKEQLQLMEDTIEEYSSSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFSRLSEEERTFTDRCCHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSREYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1715030 1719208 + Hsped.08g01900.1 Hepe08g0190 576162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0190 229 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
Hepe08g0190 229 CDD GINS_B_Sld5 168 229 IPR031633 -
Hepe08g0190 229 SUPERFAMILY GINS helical bundle-like 19 154 IPR036224 -
Hepe08g0190 229 CDD GINS_A_Sld5 24 142 IPR038749 -
Hepe08g0190 229 MobiDBLite consensus disorder prediction 1 20 - -
Hepe08g0190 229 SUPERFAMILY PriA/YqbF domain 170 229 - -
Hepe08g0190 229 MobiDBLite consensus disorder prediction 1 22 - -
Hepe08g0190 229 FunFam DNA replication complex GINS protein SLD5 10 219 - -
Hepe08g0190 229 PANTHER SLD5 PROTEIN 12 229 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Hepe08g0190 229 Gene3D - 11 219 - -
Hepe08g0190 229 Pfam GINS complex protein helical bundle domain 76 138 IPR021151 -
Hepe08g0190 229 PIRSF GINS_Sld5 1 229 IPR008591 GO:0006261(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0190 K10735 - csv:101210888 422.935