Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0194 ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCATACACTTTACCTGATGAACCCAAATTATGTACCGTACTCTGACACCCACTCTCAGACGCAAACCCAAACGCCACCCAATATGCTCTTTCTCAACCCTTCTCCCCACGCGCTTTCCCCTTCCACTCTCTCCCACGCGCCTCCTTCCACCAACAACAACCACTTCGTCGGAATTCCCATCCCAACCACCGACGCTCCTCGTCCATCCTACCACGACATCTCCGCCCTCCATTCCATCCCACCTCAGCGTCTCCACTACAATCTATGGGCTCCGATGGATCAATCAACCGCCGATTTGGGGTTCCGCCGCCCGACGACGACACAGCAACAGGGTTTGTCCTTGAGCCTCTCCTCCCAACAGTCGCTTTACCGGTCGCTATCGGCGGAGCAGGAGATTCCGACAATCTCGCCGAGGAGTACGACTGGAGATGAAATTCGGATGTCGGGAAATTCACCGACGTCGGTGTCGGTGGTGTCGAGTGGAATGACGGGAGTTCAAAGTGTGATATTGGGGTCCAAGTACTTGAAAGCTGCACAACTACTTTTGGATGAAGTAGTTAATGTTGGTAAAGCTGGAAATTTTAATCATAAAACTGACAAAGGAGATGAGACAAAGGACAAGATGAAGATGAAGAGAGAATCAACAGTTGCAATTCCTGACACCTCCGTCTGCGGCGGCGAAAGCACTTCCAAGCCTGCCGCTGACCTCACCACTGCTCAAAGACAGGACCTTCAGATGAAGAAAGCTAAGCTTATTGGCATGCTTGATGAGGTGGAGCAAAAGTACAGACAGTACCACCAGCAAATGGCAGCAGTGGTTAGCTCCTTCGAGCATGTAGCAGGGTTGGGTTCGGCCAAGTCCTACGCCTCGCTTGCTTTACAAACAATTTCAAAGCAATTTCGGTGCTTGAAAGATGCAATATGTGCACAGATAAAATCCACAGGGAAAAGTTTGGGAGAAGATGATTTGTTGGGTGGCAAAATTGAAGGGTCCAGATTGAGATACGTGGACCATCATCTACGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAACACTTGGAGACCTCAAAGAGGCTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCGTATCCCAAGGATTCAGACAAGATTATTCTAGCCAAACAAACGGGACTCACAAGGAGCCAAGTTTCTAATTGGTTTATAAACGCGAGAGTTCGTCTATGGAAACCAATGGTTGAGGAAATGTATTTAGAAGAAATCAAAGATCAAGAACAAAATGGCGATTCCCACGACATGATCATCAACAGAAACAACAAAAACGAACAGAACAAGCAACATGGAGGAGGAGGAGATCAAGTACTAAACCACCAGATGGATGATCCACAATCCAAGACAGAAAATTTGATGAACAACAACAATTCTCTCACCGATCACGTTTCAAATTCTTCAATCTCATCATCTTCAATGTTAGGAGGATCCCTTCAAACTCATTCAGGCTTCAACCTCGTACGACCATCCTCCGACATGATCCTCACAAGTCCCAAAAAACAAAGGACCACAAACAACAACAACAACAACAACCATCTCGAAACCCCATCCACAAAAGCCATGCTTTTAAGAGACAATATTAATGACACTACAAAACACCTTGAGATGAACATGAACATGAATCATAATCAAGATCATCATGGAGCTGGATTTGGTACTTTCCCAATTGGTGAAATTGGATCAAGGTTCAATTCCGAGATGTTGACACCAAGATTTCATGGAAATGGCGTCTCTCTCACTCTTGGCCTTCCACACAATTCAGATCATAATCTCTCTCTTTCACAAACCCAACAACAAAATTACCTCTCCAACCCAAATCTTCACTTGGGGAGAAGGCTTGATATCACCCATAATGGCGGAGCACCGCCTGATTTCTCCGACATCAATCCTGCCCCGCCGCCTCATCCCGCCTACGACCGCGTCGAAATTCAAACCACCAAAAGGTTTGCCGCCCAACTATTACCTGATTTTGTCGCTTGA 2103 46.6 MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTQTQTPPNMLFLNPSPHALSPSTLSHAPPSTNNNHFVGIPIPTTDAPRPSYHDISALHSIPPQRLHYNLWAPMDQSTADLGFRRPTTTQQQGLSLSLSSQQSLYRSLSAEQEIPTISPRSTTGDEIRMSGNSPTSVSVVSSGMTGVQSVILGSKYLKAAQLLLDEVVNVGKAGNFNHKTDKGDETKDKMKMKRESTVAIPDTSVCGGESTSKPAADLTTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMAAVVSSFEHVAGLGSAKSYASLALQTISKQFRCLKDAICAQIKSTGKSLGEDDLLGGKIEGSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEQNGDSHDMIINRNNKNEQNKQHGGGGDQVLNHQMDDPQSKTENLMNNNNSLTDHVSNSSISSSSMLGGSLQTHSGFNLVRPSSDMILTSPKKQRTTNNNNNNNHLETPSTKAMLLRDNINDTTKHLEMNMNMNHNQDHHGAGFGTFPIGEIGSRFNSEMLTPRFHGNGVSLTLGLPHNSDHNLSLSQTQQQNYLSNPNLHLGRRLDITHNGGAPPDFSDINPAPPPHPAYDRVEIQTTKRFAAQLLPDFVA 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1759131 1763787 - Hsped.08g01940.1 Hepe08g0194 576166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0194 700 ProSiteProfiles 'Homeobox' domain profile. 372 435 IPR001356 GO:0003677(InterPro)
Hepe08g0194 700 SMART HOX_1 375 439 IPR001356 GO:0003677(InterPro)
Hepe08g0194 700 SUPERFAMILY Homeodomain-like 376 441 IPR009057 -
Hepe08g0194 700 MobiDBLite consensus disorder prediction 464 492 - -
Hepe08g0194 700 SMART prehox3 181 327 IPR006563 -
Hepe08g0194 700 Pfam Homeobox KN domain 392 431 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe08g0194 700 CDD homeodomain 375 436 IPR001356 GO:0003677(InterPro)
Hepe08g0194 700 Gene3D - 370 449 - -
Hepe08g0194 700 MobiDBLite consensus disorder prediction 656 675 - -
Hepe08g0194 700 Pfam Associated with HOX 186 325 IPR006563 -
Hepe08g0194 700 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 137 477 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe08g0194 700 MobiDBLite consensus disorder prediction 153 173 - -
Hepe08g0194 700 Coils Coil 259 286 - -
Hepe08g0194 700 FunFam BEL1-like homeodomain protein 9 378 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0194 Hepe-Chr8:1759131 Hepe08g0990 Hepe-Chr8:9375544 2.94e-86 dispersed
Hepe05g0443 Hepe-Chr5:5748508 Hepe08g0194 Hepe-Chr8:1759131 6.49e-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56085 PF07526 POX 3.70E-46 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0194 - - - 0.0