Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0225 | ATGGCAAGCCAGAGAGTTGAAGAAACTGGTCTTTCAAGCCATCATCTTCCATATAATCCACTTCTTTATGGAATTAACAACAACAATAATCCTTCCTCCACTTTGATAAATCATGATGGCCCAGCTTTTGAGTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGGCATGGAGCAGCTAAATTGAATAAACTCGATCATCACGAACCTAGACAAAGCTTTTTTTCAGGCAGAGCTGCAGCAACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATTCCAACAAACTCCAAGAGGAATTAGTTTGAGAAGAGGAGATGAAGAGAGCACAGATGAGTCAGGAGGATCAGCTGTGAATATTCATACAATAAGCAAATCTGATCATCATTATAATCAAATGGAATTGGAATTGGAGGAAGAATCTCCAATTAGTAAAAAAAAAGCAATTAGTTCTTCTTCTTCTTCAGGTCATCACAGCTTTATTCAGAAGCATCTACACCAGATTCAACCTCAAATCATCCTTACTGATGTTTCAACAACTGCACTATCAACACAACATCATCACTCCCCTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAAAAACATCTTGACGTTAAGACATTGAGACGTTTAGCTCAGAATAGAGAGGCTGCGAGGAAGAGTCGACTAAGAAAAAAGGCTTACGTGCAGCAACTTGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAACAAGACCTTCAACGAGCTCGATCTCAGGGATTGTTTCTGGGTGCTGGCGGCGGCATTGTCAGCTCTGGAGGTGCAATGTTTGATATGGAATATGGAAGGTGGTTGGAAGATAACCACCGGCACACGGCGGAGCTTCGTGGAGCATTGGAGGCGCGTCTACCAGACGGAGAGCTGAGATTGATGGTAGACGCCTGCATTTGCCATTACGACGAAATTTTCCGGCTGAAAGAAGAGGCTGCTAAGTCCGACGTCTTCCATCTCATCACCGGAATTTGGATGTCTCCGGCCGAGCGTTGCTTCCTCTGGATCGGCGGATTCCGGCCTTCCGATCTAATTAAGATGTTAATGTCACAACTGGATCCAATAACTGAACAACAAGTGATGGAAATTTACAAGCTACAACATTTATCACTCCAGGCTGAAGAGGCTTTATCACAAGGCCTCGATCAGCTCCATCACTCTTTGACCGAGACCATCGCCAGCGGTCCCCTCATCCACGGCATCAACCACATGGTTTTGGCCATTGACAAACTTTCAAATCTCCAAGGTTTTCTTCATCAGGCTGATATTTTGAGACAACAAACACTTCACCAACTGCATAGGATACTCACCGTTCGACAAGCAGCCAAATGTTTTGTGGTAATCGGTGAATATTATAGTAGATTAAGAGCCCTAAGTACCCTATGGTCCTCTCGTCCAAAGGAGTAA | 1449 | 43.69 | MASQRVEETGLSSHHLPYNPLLYGINNNNNPSSTLINHDGPAFEFGELEQAIVLQGHGAAKLNKLDHHEPRQSFFSGRAAATLEMFPSWPIKFQQTPRGISLRRGDEESTDESGGSAVNIHTISKSDHHYNQMELELEEESPISKKKAISSSSSSGHHSFIQKHLHQIQPQIILTDVSTTALSTQHHHSPQQKRKGCGSISTSQKHLDVKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGGIVSSGGAMFDMEYGRWLEDNHRHTAELRGALEARLPDGELRLMVDACICHYDEIFRLKEEAAKSDVFHLITGIWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHLSLQAEEALSQGLDQLHHSLTETIASGPLIHGINHMVLAIDKLSNLQGFLHQADILRQQTLHQLHRILTVRQAAKCFVVIGEYYSRLRALSTLWSSRPKE | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1986057 | 1991701 | - | Hsped.08g02250.1 | Hepe08g0225 | 576197 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0225 | 482 | MobiDBLite | consensus disorder prediction | 146 | 161 | - | - | |
Hepe08g0225 | 482 | Pfam | bZIP transcription factor | 209 | 251 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0225 | 482 | Pfam | Seed dormancy control | 289 | 364 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe08g0225 | 482 | CDD | bZIP_HBP1b-like | 210 | 261 | - | - | |
Hepe08g0225 | 482 | FunFam | BZIP family transcription factor | 209 | 258 | - | - | |
Hepe08g0225 | 482 | Coils | Coil | 229 | 256 | - | - | |
Hepe08g0225 | 482 | Gene3D | - | 209 | 258 | - | - | |
Hepe08g0225 | 482 | ProSiteProfiles | DOG1 domain profile. | 271 | 479 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe08g0225 | 482 | MobiDBLite | consensus disorder prediction | 97 | 118 | - | - | |
Hepe08g0225 | 482 | MobiDBLite | consensus disorder prediction | 180 | 205 | - | - | |
Hepe08g0225 | 482 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 208 | 252 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0225 | 482 | SMART | brlzneu | 205 | 287 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0225 | 482 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 150 | 482 | - | - | |
Hepe08g0225 | 482 | SUPERFAMILY | Leucine zipper domain | 210 | 253 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0225 | 482 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 213 | 228 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g0225 | 482 | MobiDBLite | consensus disorder prediction | 138 | 161 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g1296 | Hepe-Chr7:40945645 | Hepe08g0225 | Hepe-Chr8:1986057 | 8.61e-142 | dispersed | |
Hepe08g0225 | Hepe-Chr8:1986057 | Hepe10g0543 | Hepe-Chr10:6451084 | 3.53e-109 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56091 | PF14144 | DOG1 | 1.10E-29 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0225 | K14431 | - | csv:101223216 | 592.808 |