Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0225 ATGGCAAGCCAGAGAGTTGAAGAAACTGGTCTTTCAAGCCATCATCTTCCATATAATCCACTTCTTTATGGAATTAACAACAACAATAATCCTTCCTCCACTTTGATAAATCATGATGGCCCAGCTTTTGAGTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGGCATGGAGCAGCTAAATTGAATAAACTCGATCATCACGAACCTAGACAAAGCTTTTTTTCAGGCAGAGCTGCAGCAACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATTCCAACAAACTCCAAGAGGAATTAGTTTGAGAAGAGGAGATGAAGAGAGCACAGATGAGTCAGGAGGATCAGCTGTGAATATTCATACAATAAGCAAATCTGATCATCATTATAATCAAATGGAATTGGAATTGGAGGAAGAATCTCCAATTAGTAAAAAAAAAGCAATTAGTTCTTCTTCTTCTTCAGGTCATCACAGCTTTATTCAGAAGCATCTACACCAGATTCAACCTCAAATCATCCTTACTGATGTTTCAACAACTGCACTATCAACACAACATCATCACTCCCCTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAAAAACATCTTGACGTTAAGACATTGAGACGTTTAGCTCAGAATAGAGAGGCTGCGAGGAAGAGTCGACTAAGAAAAAAGGCTTACGTGCAGCAACTTGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAACAAGACCTTCAACGAGCTCGATCTCAGGGATTGTTTCTGGGTGCTGGCGGCGGCATTGTCAGCTCTGGAGGTGCAATGTTTGATATGGAATATGGAAGGTGGTTGGAAGATAACCACCGGCACACGGCGGAGCTTCGTGGAGCATTGGAGGCGCGTCTACCAGACGGAGAGCTGAGATTGATGGTAGACGCCTGCATTTGCCATTACGACGAAATTTTCCGGCTGAAAGAAGAGGCTGCTAAGTCCGACGTCTTCCATCTCATCACCGGAATTTGGATGTCTCCGGCCGAGCGTTGCTTCCTCTGGATCGGCGGATTCCGGCCTTCCGATCTAATTAAGATGTTAATGTCACAACTGGATCCAATAACTGAACAACAAGTGATGGAAATTTACAAGCTACAACATTTATCACTCCAGGCTGAAGAGGCTTTATCACAAGGCCTCGATCAGCTCCATCACTCTTTGACCGAGACCATCGCCAGCGGTCCCCTCATCCACGGCATCAACCACATGGTTTTGGCCATTGACAAACTTTCAAATCTCCAAGGTTTTCTTCATCAGGCTGATATTTTGAGACAACAAACACTTCACCAACTGCATAGGATACTCACCGTTCGACAAGCAGCCAAATGTTTTGTGGTAATCGGTGAATATTATAGTAGATTAAGAGCCCTAAGTACCCTATGGTCCTCTCGTCCAAAGGAGTAA 1449 43.69 MASQRVEETGLSSHHLPYNPLLYGINNNNNPSSTLINHDGPAFEFGELEQAIVLQGHGAAKLNKLDHHEPRQSFFSGRAAATLEMFPSWPIKFQQTPRGISLRRGDEESTDESGGSAVNIHTISKSDHHYNQMELELEEESPISKKKAISSSSSSGHHSFIQKHLHQIQPQIILTDVSTTALSTQHHHSPQQKRKGCGSISTSQKHLDVKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGGIVSSGGAMFDMEYGRWLEDNHRHTAELRGALEARLPDGELRLMVDACICHYDEIFRLKEEAAKSDVFHLITGIWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHLSLQAEEALSQGLDQLHHSLTETIASGPLIHGINHMVLAIDKLSNLQGFLHQADILRQQTLHQLHRILTVRQAAKCFVVIGEYYSRLRALSTLWSSRPKE 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1986057 1991701 - Hsped.08g02250.1 Hepe08g0225 576197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0225 482 MobiDBLite consensus disorder prediction 146 161 - -
Hepe08g0225 482 Pfam bZIP transcription factor 209 251 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0225 482 Pfam Seed dormancy control 289 364 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe08g0225 482 CDD bZIP_HBP1b-like 210 261 - -
Hepe08g0225 482 FunFam BZIP family transcription factor 209 258 - -
Hepe08g0225 482 Coils Coil 229 256 - -
Hepe08g0225 482 Gene3D - 209 258 - -
Hepe08g0225 482 ProSiteProfiles DOG1 domain profile. 271 479 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe08g0225 482 MobiDBLite consensus disorder prediction 97 118 - -
Hepe08g0225 482 MobiDBLite consensus disorder prediction 180 205 - -
Hepe08g0225 482 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 208 252 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0225 482 SMART brlzneu 205 287 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0225 482 PANTHER TRANSCRIPTION FACTOR TGA9 150 482 - -
Hepe08g0225 482 SUPERFAMILY Leucine zipper domain 210 253 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0225 482 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 213 228 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g0225 482 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1296 Hepe-Chr7:40945645 Hepe08g0225 Hepe-Chr8:1986057 8.61e-142 dispersed
Hepe08g0225 Hepe-Chr8:1986057 Hepe10g0543 Hepe-Chr10:6451084 3.53e-109 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56091 PF14144 DOG1 1.10E-29 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0225 K14431 - csv:101223216 592.808