Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0237 ATGGAGTCTTCTCCCGACGACATCGCCGACGACCTCCAAAGCCTGAGCTTCAACTCCACTAACACCAACCGCAGCACCAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCGTTCACATCCCTTCCATTCTCAGCAAGCCTCACGCGCCTTCCTCCGATCCTTGCTGGTCCGCCGTAATCCGGATCCGATCCGAATCGTCGTCTCGCCAACTCGCCTTCTCCGACCTCAAGTTCTTCCGCCGCCTCGGTTCCGGCGACATTGGCTCCGTCTACCTCGCAGGCCTCAAGTCCGCCGGAGCCGATGGATGCCTGTTCGCGGCGAAGGTAATGGATAAGAAGGAACTAGCGAGTCGGAGTAAAGAAGGTAGAGCGAGGACTGAGAGAGAGATTTTGGAGTCTTTGGATCATCCGTTTCTTCCGACGCTCTATGCTAGTATCGACTCGCAGAAGTGGCTTTGTCTCTTGACGGAGTTCTGTCCAGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCCTAACAAACGCTTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAATACCTTCACATGATGGGGATCGTTTACCGTGATTTGAAGCCGGAAAATGTGCTGGTACGATCGGATGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAATGTGATGAATCAACGGCGACCCCACAGGTTATCACGGCTAAAAATCCGGCAAATGGCACCGCTCCACCTAAGGACTACCAAATTGATGCCCCTTCTTTCACATCATCCTCCTGCATGCTTCCAAACTGCATAGTCCCCGCCGTGTCCTGTTTCAACCCAAAACGCAGGCGCAAGAAGAAGGCCGCCCACCGTAATGGACCCGAGTTTGTTGCCGAACCGGTCGACGTCCGGTCAATGTCATTTGTCGGCACCCACGAGTATTTGGCGCCGGAGATTGTCTCCGGTGAGGGCCATGGAAGTGCAGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCCAGAGCCCTTGAGTTCCCTAAAGAACCAGCGGTGCCTGCGGTGGCGAAGGACCTCATCTCGCAGTTACTGGTCAAAGATCCGGCAAGGCGGCTGGGGTCAACGAAAGGGTCGTCGGCGATCAAGCAGCATTCATTTTTTCAAGGTGTAAATTGGGCATTATTGAGATGTACTTCGCCACCATTTATTCCTCCACCTTTTAGTAGAGAAGTTGCACCGGAAGAAAGCTGCCCAGAGGCCCCAGTGGAGTATTATTAG 1353 53.95 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSVHIPSILSKPHAPSSDPCWSAVIRIRSESSSRQLAFSDLKFFRRLGSGDIGSVYLAGLKSAGADGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSQKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTATPQVITAKNPANGTAPPKDYQIDAPSFTSSSCMLPNCIVPAVSCFNPKRRRKKKAAHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPAVAKDLISQLLVKDPARRLGSTKGSSAIKQHSFFQGVNWALLRCTSPPFIPPPFSREVAPEESCPEAPVEYY 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2119701 2124016 - Hsped.08g02370.1 Hepe08g0237 576209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0237 450 SMART serkin_6 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0237 450 FunFam serine/threonine-protein kinase D6PK-like 307 430 - -
Hepe08g0237 450 SUPERFAMILY Protein kinase-like (PK-like) 57 437 IPR011009 -
Hepe08g0237 450 FunFam serine/threonine-protein kinase D6PK-like 166 233 - -
Hepe08g0237 450 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0237 450 MobiDBLite consensus disorder prediction 9 35 - -
Hepe08g0237 450 PANTHER FLIPPASE KINASE 1-RELATED 24 431 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe08g0237 450 FunFam serine/threonine-protein kinase D6PKL2 78 165 - -
Hepe08g0237 450 MobiDBLite consensus disorder prediction 1 35 - -
Hepe08g0237 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0237 450 Gene3D Transferase(Phosphotransferase) domain 1 308 430 - -
Hepe08g0237 450 Gene3D Transferase(Phosphotransferase) domain 1 166 241 - -
Hepe08g0237 450 CDD STKc_phototropin_like 77 423 - -
Hepe08g0237 450 Pfam Protein kinase domain 309 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0237 450 Pfam Protein kinase domain 82 243 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0237 450 Gene3D Phosphorylase Kinase; domain 1 78 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0237 Hepe-Chr8:2119701 Hepe08g2554 Hepe-Chr8:67162861 1.07e-124 dispersed
Hepe08g0237 Hepe-Chr8:2119701 Hepe08g0238 Hepe-Chr8:2139715 3.33e-132 tandem
Hepe08g0109 Hepe-Chr8:909973 Hepe08g0237 Hepe-Chr8:2119701 7.16e-78 transposed
Hepe04g1012 Hepe-Chr4:64757765 Hepe08g0237 Hepe-Chr8:2119701 1.98e-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73017 PF00069 Pkinase 3.10E-35 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0237 K08286 - csv:101207262 819.305