Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0238 ATGAGTAATAGCCAAGGCCACATCTTCTCTCTTTCGCTCTATTGTTATACCCAAAAGATGACTACATTTGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCGGGGATGAGTTACAGGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCATGCAATTGATATCAGAACCTTACGTAAGAGGTCAGGCCAGCAACGTGAAGTTGATAAAGATGCTTTGCGAAAGAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCGTCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTGAAACAGGCTTTGAGGGGCTTGTGCATATCTCAGGCTGCAGAAATGGCTGCTACAAAGAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAAAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATCGGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAATTTTCCATTGTTTCAGAAAGAATTATGTCAACTTCTCAAAATAAGATGCCTGAACTGTTGCATAAAACTGAGGCAGATATATCAAACCAAGGAGCTGAGTCTTCTTCTCTTAAGGACACTGGGGTATCAGAAGAGGCGTATGTGGATAGATTGATGTCAAAGGATCTTGCAGTCAATACGGTTACCGAAGTGATAAGTATAAAGCCACTTGATGCGGTGGGAAAACTTAAATCCCCTTCCTTTACTCCTGGTGAGAAGGATCTGGCTCTGAACAGCATGGAAAATTCCAAAACTGAAGATTTGACAAAAATTTCATTGCCAGAGAAGGAGGACAGAGGTACAATGCGTTGTTTATCTTCTCTATCAAGCTCTGGATCTGTTGTTAAGCCAAACAAATTAGCTTTCAATAATACACGTTTCATAAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGAAAAACTCGAACCAAATTCCTCCCCTAGCATGTTTGGTATGTGCACAGTATCGGTTGACACTGATTTGGGTTCCATACCAGAAAAATCTGAGAACAAGATGCCAGAAAATGCACAACATCACGAGAGTAAAGAAGAAGAGAAAGGTTCTTCTGTCTCTTGTAGTACAACTTTAGGTATTGAAGTAGGTGCAAATGTAGTAAACACAGAGTCTAGTAGACCTGGTACATCTCTCAACTGCTGTAACAGGAACAGACCAACTATTTTGCCATCCGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTATTGGCGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGACTTGAAATGGGAAGCTATCCACCACATTCAGGATCAACATAAATGCCTAGGTCTAAGAAACTTCAAGCTGCTAAGGAGACTTGGTCTTGGGGACATTGGAACTGTGTATCTCTCTGAGCTATGCGAATCAAGCTGTCTATTTGCTATTAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGGAAAAAAATACTTCGGGCACAAACTGAAAGAGAGATTCTGCAAATGCTCGACCATCCATTTCTCCCTACATTATATGCTCATTTTGAGACGGATAAGCACTCATGCTTGGTCATGGACTACTGTCCAGGTGGAGATCTCCACGTTCTGCGACAGAAGCAAGCATGCAAGAGTTTCCCTGAGCATGCAGTCAGGTTCTATGTTGCCGAAGTTCTTCTTGCCCTGGAGTACTTACACATGCTAGGAGTTGTTTACCGAGACCTGAAACCCGAAAATGTTCTGGTCCGAGAAGACGGGCATATAATGCTCACTGATTTTGATTTGTCCTTTAGATGTGCTGTTAACCCAATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTTCACCCATCCTGGCAAGTATCCTGCTTCACTCCCAAAGTTTTATCTGCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCAAGTCTATTACCACAGCTTATAGTCGAGCCAACTGGTGCGCGCTCCAATTCATTCGTAGGAACACACGAATACCTCGCTCCTGAGATTGTCAAGGGTGATGGCCATGGCAGTGCTGTTGATTGGTGGACTTACGGGATTTTCTTGTTTGAACTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCTGATAGCCCCATAGTTAGTTTTCATGCAAGAGATCTGATCAGATGTCTGCTGGCAAAGGAACCCGAAAATCGATTAGGCTCGACGAAAGGAGCCATCGGGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAATTGGGCTCTGATACGTTGCGCAGTTCCACCCGAGCTTCCCAAGTTTTTCGACGGTGGAACTGGTGCAATGGCAATGGATTCTGGGGAGAACACAAAGCGTAGAGATCTCGAGAATATGGAAGCGGATTCAGCAATCTTTGACCTGTTTTAG 2634 43.24 MSNSQGHIFSLSLYCYTQKMTTFASTSEIVESTEEFDSEKAGMSYRLDVGKRFSIEDDINRLFHAIDIRTLRKRSGQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAATKRLTRSVGSPRISEAGTIKRLYRAVVVEANGSGVPVNESKANLVEFSIVSERIMSTSQNKMPELLHKTEADISNQGAESSSLKDTGVSEEAYVDRLMSKDLAVNTVTEVISIKPLDAVGKLKSPSFTPGEKDLALNSMENSKTEDLTKISLPEKEDRGTMRCLSSLSSSGSVVKPNKLAFNNTRFIKPIFRTKNFVKKKEKLEPNSSPSMFGMCTVSVDTDLGSIPEKSENKMPENAQHHESKEEEKGSSVSCSTTLGIEVGANVVNTESSRPGTSLNCCNRNRPTILPSDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHIQDQHKCLGLRNFKLLRRLGLGDIGTVYLSELCESSCLFAIKVMDKEFLASRKKILRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQACKSFPEHAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSFRCAVNPMLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDSPIVSFHARDLIRCLLAKEPENRLGSTKGAIGIKQHPFFEGLNWALIRCAVPPELPKFFDGGTGAMAMDSGENTKRRDLENMEADSAIFDLF 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2139715 2144143 + Hsped.08g02380.1 Hepe08g0238 576210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0238 877 ProSiteProfiles Protein kinase domain profile. 492 824 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0238 877 FunFam serine/threonine-protein kinase D6PK-like 576 643 - -
Hepe08g0238 877 MobiDBLite consensus disorder prediction 432 464 - -
Hepe08g0238 877 Gene3D Phosphorylase Kinase; domain 1 490 571 - -
Hepe08g0238 877 CDD STKc_phototropin_like 492 842 - -
Hepe08g0238 877 MobiDBLite consensus disorder prediction 380 418 - -
Hepe08g0238 877 SUPERFAMILY Protein kinase-like (PK-like) 466 842 IPR011009 -
Hepe08g0238 877 FunFam Serine/threonine-protein kinase D6PK-like 490 575 - -
Hepe08g0238 877 FunFam serine/threonine-protein kinase D6PK-like 719 842 - -
Hepe08g0238 877 Gene3D Transferase(Phosphotransferase) domain 1 572 640 - -
Hepe08g0238 877 Pfam Protein kinase domain 493 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0238 877 Pfam Protein kinase domain 721 824 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0238 877 MobiDBLite consensus disorder prediction 356 379 - -
Hepe08g0238 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g0238 877 PANTHER FLIPPASE KINASE 1-RELATED 377 848 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe08g0238 877 Gene3D Transferase(Phosphotransferase) domain 1 719 838 - -
Hepe08g0238 877 SMART serkin_6 492 824 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g0238 877 MobiDBLite consensus disorder prediction 353 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1012 Hepe-Chr4:64757765 Hepe08g0238 Hepe-Chr8:2139715 1.09e-230 dispersed
Hepe05g2100 Hepe-Chr5:71584084 Hepe08g0238 Hepe-Chr8:2139715 2.78e-168 dispersed
Hepe07g1432 Hepe-Chr7:47620532 Hepe08g0238 Hepe-Chr8:2139715 5.20e-176 dispersed
Hepe08g0109 Hepe-Chr8:909973 Hepe08g0238 Hepe-Chr8:2139715 4.48e-70 dispersed
Hepe08g0238 Hepe-Chr8:2139715 Hepe08g2554 Hepe-Chr8:67162861 1.93e-123 dispersed
Hepe08g0237 Hepe-Chr8:2119701 Hepe08g0238 Hepe-Chr8:2139715 3.33e-132 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73018 PF00069 Pkinase 3.60E-36 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0238 - - - 0.0