Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0239 ATGAGGGCGTTGCAATTGCATCTTAATCTTGTAAACCCATTTTGCCATTTCTGCCCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTAAATCTCTCGCCATTGCTTGTTTTTAAACCTATAAAATACCTCCATCTTCAGAAATTCAATCCTTCTCGAAGTTCCCATCGAACCCATTTCGCCATTGCTTCCATGGCCGATTCCGCTCTTTCCACAAGCTCAGAGACGAAGACGAAACCTTTCTCTGTTCTTTTTGTGTGCTTGGGCAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGAGACCTGGTCATCAAGAAGGGTCTCGATTCCAAATTCTTAATCGATTCTGCTGGCACCATTGGTTATCATGCGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTCAACAACGTGGGATAGCGATAACATCTCTATCTAGGCCAATCAAGGCATCTGATTTTGTAAAATTTGATCTTATTCTTGCCATGGACAAGCAAAACAAAGAGGATCTATTAAGGGCTTTTGATAGGTGGGAAATTAGGGATACCCTTCCTGATGCATATAAGAAGGTCAAATTAATGTGCTCGTATTGTCGAAAGCATGAAGAAACAGAAGTGCCGGATCCTTATTACGGCGGGCAACAAGGTTTTGAGAAGGTTCTGGATTTGCTTGAAGATGCCTGCGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA 750 42.93 MRALQLHLNLVNPFCHFCPASSSSSSSSSSSLNLSPLLVFKPIKYLHLQKFNPSRSSHRTHFAIASMADSALSTSSETKTKPFSVLFVCLGNICRSPAAEGVFRDLVIKKGLDSKFLIDSAGTIGYHAGNEADPRMRAASQQRGIAITSLSRPIKASDFVKFDLILAMDKQNKEDLLRAFDRWEIRDTLPDAYKKVKLMCSYCRKHEETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 249
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 2144527 2147052 + Hsped.08g02390.1 Hepe08g0239 576211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0239 249 FunFam Low molecular weight protein-tyrosine-phosphatase 82 245 - -
Hepe08g0239 249 SUPERFAMILY Phosphotyrosine protein phosphatases I 81 240 IPR036196 -
Hepe08g0239 249 CDD LMWPTP 84 238 - -
Hepe08g0239 249 Pfam Low molecular weight phosphotyrosine protein phosphatase 85 237 IPR023485 -
Hepe08g0239 249 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 65 246 IPR052995 -
Hepe08g0239 249 Gene3D - 66 245 - -
Hepe08g0239 249 PRINTS LMW phosphotyrosine protein phosphatase signature 128 144 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe08g0239 249 PRINTS LMW phosphotyrosine protein phosphatase signature 211 226 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe08g0239 249 PRINTS LMW phosphotyrosine protein phosphatase signature 85 102 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe08g0239 249 SMART LMWPc_2 83 239 IPR023485 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0239 K25307 - csv:101207515 384.8