Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0267 ATGGCGGCAACTGTGTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCTGAGGAGCACGAGGCCGAGCTTCTCAAGGACCAGCAGGACCAGTCCCAGCCGCAATCGGAGCCCACTGCTGACTTTCCGTCCCTCGCCGCCGCTGCCGCAACCAAGCCGAAGAAGAAGAAAGGTCAGTCCATTCCCCTCTCCGAGTTTCAGACCTATGGCGGTCCTAAGCTGTTTCGTCCATCCAGTGAGCCAAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAACGAACAGAGGAGGAGCTGGACCGCAACCGGCTCGGTGGAGGTTTCAAGAGTTGGGGTCAGAATAGTTCGTTTGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGCCGAATTCTGGACGGGGTTCTAGGGTTTTTGATGACTCGAGGAGGGGCAATGATGGATCCAATAGGGAATTCAGAAGGGAACCGTTGTCCTCTAGGGCTGATGAGATTGATGATTGGGGCGCCGGGAAGAAGCCTATGATGGGTAATGGGTTTGAGAGGAGAGAGAGGGGAGGAGGAGGAGGAGGAGGAGGTTTTTTCGATTCGCAATCGTCCAAAGCGGACGAATCGGATAGTTGGGTATCAAATAAGAGCTTTTCTCCTTCTGAGGGTCGGAGATCCGGTGGTATGGGTGGGGGTTTTGAGAGAGAGCGCAGAGGAGGGTTTCCCTCTAGCGGCAGCGGCGGCGGCGCTGATTCGGACAATTGGGGCAGAAAATCTGAAGGGGCTAGAGGTGGTGGTGGTATTGGTGAGAACGGTGGTGGCGGTGATTTTGACAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCAAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAGCAATGATGGGAATCAGGAGGCTTCTGGTGCGGCGGCAGTAAAGCCAAAGAGTTCCAATCCTTTTGGAAGTGCAAGGCCAAGGGAAGAAGTATTGGCTGAGAAGGGGCAAGACTGGAAGAAGATTGATGAGCAGCTCGAGTCAATGAAAGTTAAAGATACGGCGGAGAGGGCTGAGAGATCTAGTGGGGCTATGTTTGAGAGAAAAGGCTTTGGAGTTCGAAGTGGTCGCTCTCCCGAAGATCGGTCAGGAAGGACTTGGAGAAAGCCAGAGTCTGTGGAATCTCGTCCCCAAAGTGCTGAGGTTGTTGATGATGGACCTGCTGTGGAAAATTGA 1260 53.73 MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSQPQSEPTADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKLFRPSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSSFDRGNRYSNGEDSPNSGRGSRVFDDSRRGNDGSNREFRREPLSSRADEIDDWGAGKKPMMGNGFERRERGGGGGGGGFFDSQSSKADESDSWVSNKSFSPSEGRRSGGMGGGFERERRGGFPSSGSGGGADSDNWGRKSEGARGGGGIGENGGGGDFDNWGKKSEGVRGGIGERPRLNLQPRSIPLSNDGNQEASGAAAVKPKSSNPFGSARPREEVLAEKGQDWKKIDEQLESMKVKDTAERAERSSGAMFERKGFGVRSGRSPEDRSGRTWRKPESVESRPQSAEVVDDGPAVEN 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2452039 2454782 + Hsped.08g02670.1 Hepe08g0267 576239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0267 419 MobiDBLite consensus disorder prediction 143 176 - -
Hepe08g0267 419 MobiDBLite consensus disorder prediction 204 224 - -
Hepe08g0267 419 Pfam Plant specific eukaryotic initiation factor 4B 225 377 IPR010433 GO:0003743(InterPro)
Hepe08g0267 419 Pfam Plant specific eukaryotic initiation factor 4B 7 236 IPR010433 GO:0003743(InterPro)
Hepe08g0267 419 MobiDBLite consensus disorder prediction 336 372 - -
Hepe08g0267 419 MobiDBLite consensus disorder prediction 114 142 - -
Hepe08g0267 419 MobiDBLite consensus disorder prediction 381 403 - -
Hepe08g0267 419 MobiDBLite consensus disorder prediction 1 419 - -
Hepe08g0267 419 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 404 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0267 Hepe-Chr8:2452039 Hepe10g0052 Hepe-Chr10:471943 3.83e-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0267 K03258 - csv:101214573 576.244