Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0281 ATGGGGTATTTGAAGCAGCTGCCTCCTTCGACGACGGTGCTGAAATGGCTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCTATTTCCGGCAACAACTACACCTTCTCCAACTACTCCGACGCCCTGAAGTCTCTGATGAATCTGAACCAACTTCAGCTCAACAATCTCTCCGTCGCAAAAGACGTCGGAAAAGCGTTCGGGCTTCTCGCCGGAATCGCGTGTGATCGGTTTCCGACTTGGGTGATCTTGCTTATTGGATCTGTTGAAGGAGTTGTTGGCTATGGCGCCCAGTGGCTGGTCGTTAGCCAGAGAGTTTCCCCTCTCCCTTATTGGCAGATGTGCATCTTTTTGTGTATGGGCGGAAACAGCACCACATGGATGAACACGGCGGTGCTGGTGACCTGCATCAGAAACTTCCGAAAGAATCGCGGCCCTGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACTGCTCTGTTTTCCAACGACCCATCTTCCTTCCTCCTCATGCTCTCCCTCGTCCCCTTCGCCGTCTGCCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCCTCAACCCCCCTAAAAGCCGCCGCCCACGCCCAGGAGGAGTCTAACTTCTTCGCCGTCTTCAACGCCCTCGCCGTCGTCGTCGCCGTCTATCTCCTGGGCTTCGATTTAATCAAAAAATCCGGCACACTCGTCTCCCAGTTGTTCTCCCTCGGGCTTCTGATTCTCCTCGGAGCCCCTCTGGTAATTCCGATTTACTCGTTTTGGAAAAGCTGGAATTCGAATCGGGTCCGATCCGATTTGGAGGCCCGAATTGAGGAGCCGTTGCTGAAGGAGGAGGTTGCGGTTGCGGTTGCGGTTTCGGCGCCGGAAATTGCAGAGGAGGAGGAGAAGCGACGGCCGTTGATCGGAGAAGAACACACGATTATGGAGGCGGTGAAAACGATTGATTTCTGGGTATTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACAGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTTGGTTACGCCGATGTTTCCATGTTCGTCTCTCTCACAAGTATTTGGGGATTTTTCGGTCGGATTCTTTCCGGTTCACTTTCCGAGCATTTTCTCAAAAAAGCAGGCACACCAAGGCCTCTATGGAACGCTGCATCTCAAATTCTAATGACCGTTGGGTACGTTTTGATGGCGATGGCAATGCCAGGGTCCCTCTACATCGGCTCGGTGGTCGTCGGAATATGCTACGGCATACGTCTCTCCATCACCGTCCCCACCGCCTCGGAGCTGTTCGGCCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTAAACCTCCCCATCGGATCCTTCCTCTTCTCCGGTCTCCTCGCCGGATTCCTCTACGACATGGAGGCGACCCCGACCGAAGGCGGCGGCAACACGTGCATCGGCGGGCATTGCTACAGAATTGTGTTCCTTGTCATGGCCTCAGCTTGTGTGATTGGATTTGTTTTGGACATTTGGTTGGCGTTTAGAACCAAGGAGCTTTATTCCAAGCTGAAAGCCAACAAGAAATCAAAGAAGACAAACAGCAACAACAGCTCGTAG 1647 53.13 MGYLKQLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLNQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSVEGVVGYGAQWLVVSQRVSPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPSSFLLMLSLVPFAVCLFAMFFLREIPPPSTPLKAAAHAQEESNFFAVFNALAVVVAVYLLGFDLIKKSGTLVSQLFSLGLLILLGAPLVIPIYSFWKSWNSNRVRSDLEARIEEPLLKEEVAVAVAVSAPEIAEEEEKRRPLIGEEHTIMEAVKTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGSLSEHFLKKAGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVVVGICYGIRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFLVMASACVIGFVLDIWLAFRTKELYSKLKANKKSKKTNSNNSS 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2535787 2539442 - Hsped.08g02810.1 Hepe08g0281 576253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0281 548 Pfam Nodulin-like 15 265 IPR010658 -
Hepe08g0281 548 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 533 - GO:0016020(PANTHER)
Hepe08g0281 548 Gene3D MFS general substrate transporter like domains 11 206 IPR036259 -
Hepe08g0281 548 SUPERFAMILY MFS general substrate transporter 16 527 IPR036259 -
Hepe08g0281 548 CDD MFS_Mch1p_like 14 515 - -
Hepe08g0281 548 Gene3D MFS general substrate transporter like domains 326 546 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0281 Hepe-Chr8:2535787 Hepe09g0146 Hepe-Chr9:1179677 1.37e-98 dispersed
Hepe02g0433 Hepe-Chr2:4182015 Hepe08g0281 Hepe-Chr8:2535787 4.37e-81 transposed
Hepe02g1321 Hepe-Chr2:16722662 Hepe08g0281 Hepe-Chr8:2535787 2.19e-117 transposed
Hepe02g3404 Hepe-Chr2:83488846 Hepe08g0281 Hepe-Chr8:2535787 1.76e-104 transposed
Hepe10g1374 Hepe-Chr10:50072324 Hepe08g0281 Hepe-Chr8:2535787 8.13e-76 transposed
Hepe02g0432 Hepe-Chr2:4180962 Hepe08g0281 Hepe-Chr8:2535787 2.77e-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0281 - - - 0.0